RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 PMVKQ15126 192 aa9.46□□□□□ -0.9
ZIC3-201ENST00000287538 TMEM263Q8WUH6 116 aaKnown RBP9.46□□□□□ -0.9
ZIC3-201ENST00000287538 LENEPQ9Y5L5 61 aa9.46□□□□□ -0.9
ZIC3-201ENST00000287538 STAB1Q9NY15 2570 aa9.46□□□□□ -0.9
ZIC3-201ENST00000287538 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
ZIC3-201ENST00000287538 PF4P02776 101 aa9.46□□□□□ -0.9
ZIC3-201ENST00000287538 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
ZIC3-201ENST00000287538 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 STHQ8IWL8 128 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
ZIC3-201ENST00000287538 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 P0DMU3 169 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 LGALS9O00182 355 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
ZIC3-201ENST00000287538 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
ZIC3-201ENST00000287538 RPL13AP40429 203 aaKnown RBP9.43□□□□□ -0.9
ZIC3-201ENST00000287538 PROK1P58294 105 aa9.43□□□□□ -0.9
ZIC3-201ENST00000287538 KLLNB2CW77 178 aa9.43□□□□□ -0.9
ZIC3-201ENST00000287538 AMELXQ99217 191 aa9.43□□□□□ -0.9
ZIC3-201ENST00000287538 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
ZIC3-201ENST00000287538 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
ZIC3-201ENST00000287538 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1A1P0DJD3 496 aaKnown RBP9.42□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1CP0DJD4 496 aa9.42□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1FQ15415 496 aaKnown RBP9.42□□□□□ -0.9
ZIC3-201ENST00000287538 TRIAP1O43715 76 aa9.41□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
ZIC3-201ENST00000287538 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
ZIC3-201ENST00000287538 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
ZIC3-201ENST00000287538 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
ZIC3-201ENST00000287538 Q8N2B8 174 aa9.4□□□□□ -0.9
ZIC3-201ENST00000287538 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
ZIC3-201ENST00000287538 TMEM126AQ9H061 195 aa9.4□□□□□ -0.9
ZIC3-201ENST00000287538 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 PPP1R17O96001 155 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
ZIC3-201ENST00000287538 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 PRSS2P07478 247 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 H7C423 109 aa9.39□□□□□ -0.91
ZIC3-201ENST00000287538 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
ZIC3-201ENST00000287538 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 LEPROTO15243 131 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 HILS1P60008 231 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 AKAP9Q99996 3911 aa9.38□□□□□ -0.91
ZIC3-201ENST00000287538 TRBV30A0A0K0K1B3 111 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 Q9UF83 564 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 FAM236AA0A1B0GUQ0 79 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 FAM236BA0A1B0GV22 79 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 M0R2P5 195 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 CLEC2BQ92478 149 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
ZIC3-201ENST00000287538 RNASE13Q5GAN3 156 aaKnown RBP9.37□□□□□ -0.91
ZIC3-201ENST00000287538 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
ZIC3-201ENST00000287538 ICOSQ9Y6W8 199 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 VCYO14598 125 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
ZIC3-201ENST00000287538 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 NPC2P61916 151 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
ZIC3-201ENST00000287538 COX6CP09669 75 aa9.35□□□□□ -0.91
ZIC3-201ENST00000287538 C9orf153Q5TBE3 101 aa9.35□□□□□ -0.91
ZIC3-201ENST00000287538 INSP01308 110 aa9.35□□□□□ -0.91
ZIC3-201ENST00000287538 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
ZIC3-201ENST00000287538 A0A0J9YXY3 114 aa9.34□□□□□ -0.91
ZIC3-201ENST00000287538 H3BT86 120 aa9.34□□□□□ -0.91
ZIC3-201ENST00000287538 LINC01600Q96MT4 127 aa9.34□□□□□ -0.91
ZIC3-201ENST00000287538 ANK3Q12955 4377 aaKnown RBP9.34□□□□□ -0.91
ZIC3-201ENST00000287538 TRBV7-7A0A0K0K1E9 115 aa9.33□□□□□ -0.92
ZIC3-201ENST00000287538 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
ZIC3-201ENST00000287538 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
ZIC3-201ENST00000287538 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
ZIC3-201ENST00000287538 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
ZIC3-201ENST00000287538 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 LINC00315P59091 139 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 SPATA3Q8NHX4 192 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 SPXQ9BT56 116 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
ZIC3-201ENST00000287538 CSDC2Q9Y534 153 aaKnown RBP9.32□□□□□ -0.92
ZIC3-201ENST00000287538 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 KRTAP10-3P60369 221 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
ZIC3-201ENST00000287538 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms