RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 IGHV3-30P01768 117 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 IGHV3-33P01772 117 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 IGHV3-30-5P0DP03 117 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 ANKRD39Q53RE8 183 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 ICOSQ9Y6W8 199 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 RPL32P62910 135 aaKnown RBP9.22□□□□□ -0.93
ACER3-201ENST00000278544 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
ACER3-201ENST00000278544 CST9LQ9H4G1 147 aa9.22□□□□□ -0.93
ACER3-201ENST00000278544 B9D2Q9BPU9 175 aa9.21□□□□□ -0.93
ACER3-201ENST00000278544 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 OR5A1Q8NGJ0 315 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 GTSF1LQ9H1H1 148 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 EDA2RQ9HAV5 297 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 A0A087WX48 190 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 IGKCP01834 107 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 PMVKQ15126 192 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 FAM104AQ969W3 186 aa9.21□□□□□ -0.94
ACER3-201ENST00000278544 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
ACER3-201ENST00000278544 TRAV8-6A0A0B4J262 113 aa9.2□□□□□ -0.94
ACER3-201ENST00000278544 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
ACER3-201ENST00000278544 ZFAND6Q6FIF0 208 aa9.2□□□□□ -0.94
ACER3-201ENST00000278544 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 DPM2O94777 84 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 K7EMI3 77 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
ACER3-201ENST00000278544 LGALS9CQ6DKI2 356 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
ACER3-201ENST00000278544 F8VRH5 84 aa9.18□□□□□ -0.94
ACER3-201ENST00000278544 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
ACER3-201ENST00000278544 ESRGQ1W209 222 aa9.18□□□□□ -0.94
ACER3-201ENST00000278544 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
ACER3-201ENST00000278544 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
ACER3-201ENST00000278544 RBX1P62877 108 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 CIDEAO60543 219 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 G0S2P27469 103 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 COX6A2Q02221 97 aa9.17□□□□□ -0.94
ACER3-201ENST00000278544 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
ACER3-201ENST00000278544 TSTD3H0UI37 97 aa9.16□□□□□ -0.94
ACER3-201ENST00000278544 LINC00469Q8N7U9 141 aa9.16□□□□□ -0.94
ACER3-201ENST00000278544 TEX48A0A1B0GUV7 120 aa9.16□□□□□ -0.94
ACER3-201ENST00000278544 XCL1P47992 114 aa9.16□□□□□ -0.94
ACER3-201ENST00000278544 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
ACER3-201ENST00000278544 BATFQ16520 125 aa9.15□□□□□ -0.94
ACER3-201ENST00000278544 GEMIN7Q9H840 131 aaKnown RBP9.15□□□□□ -0.94
ACER3-201ENST00000278544 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.95
ACER3-201ENST00000278544 LINC00587B1AMM8 73 aa9.15□□□□□ -0.95
ACER3-201ENST00000278544 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.95
ACER3-201ENST00000278544 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
ACER3-201ENST00000278544 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
ACER3-201ENST00000278544 CDKN2A-AS1Q9UH64 79 aa9.14□□□□□ -0.95
ACER3-201ENST00000278544 C2orf88Q9BSF0 95 aa9.13□□□□□ -0.95
ACER3-201ENST00000278544 UBE2WQ96B02 151 aa9.13□□□□□ -0.95
ACER3-201ENST00000278544 Q9HAA7 133 aa9.13□□□□□ -0.95
ACER3-201ENST00000278544 PKIAP61925 76 aa9.13□□□□□ -0.95
ACER3-201ENST00000278544 TOMM7Q9P0U1 55 aa9.13□□□□□ -0.95
ACER3-201ENST00000278544 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
ACER3-201ENST00000278544 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
ACER3-201ENST00000278544 IGLC3P0DOY3 106 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 PLNP26678 52 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 AMELXQ99217 191 aa9.11□□□□□ -0.95
ACER3-201ENST00000278544 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
ACER3-201ENST00000278544 DDTP30046 118 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 LINC00242Q5T6M2 205 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 CTAG1AP78358 180 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 UBE2D1P51668 147 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 LELP1Q5T871 98 aa9.1□□□□□ -0.95
ACER3-201ENST00000278544 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
ACER3-201ENST00000278544 CCL25O15444 150 aa9.09□□□□□ -0.95
ACER3-201ENST00000278544 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
ACER3-201ENST00000278544 HNRNPA3P51991 378 aaKnown RBP9.08□□□□□ -0.96
ACER3-201ENST00000278544 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
ACER3-201ENST00000278544 REG3AQ06141 175 aa9.08□□□□□ -0.96
ACER3-201ENST00000278544 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
ACER3-201ENST00000278544 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
ACER3-201ENST00000278544 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
ACER3-201ENST00000278544 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
ACER3-201ENST00000278544 HINT1P49773 126 aaPredicted RBP9.06□□□□□ -0.96
ACER3-201ENST00000278544 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 MIEN1Q9BRT3 115 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 NPC2P61916 151 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 UQCR10Q9UDW1 63 aa9.06□□□□□ -0.96
ACER3-201ENST00000278544 STARD9Q9P2P6 4700 aa9.05□□□□□ -0.96
ACER3-201ENST00000278544 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
ACER3-201ENST00000278544 TIMM21Q9BVV7 248 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms