RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 IFI27L1Q96BM0 104 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
SSRP1-201ENST00000278412 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
SSRP1-201ENST00000278412 K7EQD1 137 aa8.24□□□□□ -1.09
SSRP1-201ENST00000278412 VCYO14598 125 aa8.24□□□□□ -1.09
SSRP1-201ENST00000278412 NTM-AS1Q6ZSK4 140 aa8.24□□□□□ -1.09
SSRP1-201ENST00000278412 RHODO00212 210 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 PIK3CD-AS1Q5SR53 167 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 LINC00612Q8N6U2 182 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 SS18L2Q9UHA2 77 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 ERG28Q9UKR5 140 aa8.23□□□□□ -1.09
SSRP1-201ENST00000278412 CSMD3Q7Z407 3707 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 KIR2DL4Q99706 377 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 A0A0J9YWU9 116 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 I3L3M4 83 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 LINC00694P0DN24 101 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 WFDC2Q14508 124 aa8.22□□□□□ -1.09
SSRP1-201ENST00000278412 SMIM9A6NGZ8 99 aa8.21□□□□□ -1.09
SSRP1-201ENST00000278412 PRSS1P07477 247 aa8.21□□□□□ -1.09
SSRP1-201ENST00000278412 TOMM6Q96B49 74 aa8.21□□□□□ -1.09
SSRP1-201ENST00000278412 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.09
SSRP1-201ENST00000278412 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 FBN3Q75N90 2809 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 H7C1H1 209 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 MIFP14174 115 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 DAD1P61803 113 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 CYSLTR1Q9Y271 337 aa8.21□□□□□ -1.1
SSRP1-201ENST00000278412 PRSS29PA6NIE9 313 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 A8MZ25 164 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 PPP1R17O96001 155 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 C12orf74Q32Q52 190 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 ORMDL2Q53FV1 153 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 IGIPA6NJ69 53 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 GYPEP15421 78 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 UBE2D3P61077 147 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 UBE2D2P62837 147 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 EDA2RQ9HAV5 297 aa8.2□□□□□ -1.1
SSRP1-201ENST00000278412 MRPL35Q9NZE8 188 aaKnown RBP8.2□□□□□ -1.1
SSRP1-201ENST00000278412 NANOS2P60321 138 aaKnown RBP8.19□□□□□ -1.1
SSRP1-201ENST00000278412 ODF1Q14990 250 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 Q8N3U1 123 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 C20orf203Q8NBC4 194 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 F5H768 121 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 HERV-K104P63124 156 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 GAGE6Q13070 117 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 Q6ZTC4 211 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
SSRP1-201ENST00000278412 E9PLD3 99 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 RPL32P62910 135 aaKnown RBP8.18□□□□□ -1.1
SSRP1-201ENST00000278412 ETDBQ3ZM63 59 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 SPINK8P0C7L1 97 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
SSRP1-201ENST00000278412 LGALS9CQ6DKI2 356 aa8.18□□□□□ -1.1
SSRP1-201ENST00000278412 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
SSRP1-201ENST00000278412 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
SSRP1-201ENST00000278412 PRO0461Q9UI25 63 aa8.17□□□□□ -1.1
SSRP1-201ENST00000278412 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
SSRP1-201ENST00000278412 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
SSRP1-201ENST00000278412 SPART-AS1P0CW21 52 aa8.16□□□□□ -1.1
SSRP1-201ENST00000278412 FXYD2P54710 66 aa8.16□□□□□ -1.1
SSRP1-201ENST00000278412 HIGD1BQ9P298 99 aa8.16□□□□□ -1.1
SSRP1-201ENST00000278412 RHOHQ15669 191 aa8.16□□□□□ -1.1
SSRP1-201ENST00000278412 Q6ZUT4 128 aa8.16□□□□□ -1.1
SSRP1-201ENST00000278412 PAX4O43316 350 aa8.15□□□□□ -1.1
SSRP1-201ENST00000278412 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.1
SSRP1-201ENST00000278412 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.11
SSRP1-201ENST00000278412 IGKV2D-26A0A0A0MRZ7 120 aa8.15□□□□□ -1.11
SSRP1-201ENST00000278412 MT-ATP8P03928 68 aa8.15□□□□□ -1.11
SSRP1-201ENST00000278412 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 IGLL5B9A064 214 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 PCP2Q8IVA1 136 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 DNAJC30Q96LL9 226 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 TM2D2Q9BX73 214 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 ZMAT4Q9H898 229 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 ATP5LO75964 103 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 ATP5G1P05496 136 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 GCSHP23434 173 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 FOXI1Q12951 378 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
SSRP1-201ENST00000278412 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 H3BMG7 143 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 TM2D3Q9BRN9 247 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 DNAH7Q8WXX0 4024 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 A0A087WX48 190 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 K7ERJ3 54 aa8.13□□□□□ -1.11
SSRP1-201ENST00000278412 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms