RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
SKP2-201ENST00000274254 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
SKP2-201ENST00000274254 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
SKP2-201ENST00000274254 KLK12Q9UKR0 248 aa11.61□□□□□ -0.55
SKP2-201ENST00000274254 KMT2AQ03164 3969 aa11.61□□□□□ -0.55
SKP2-201ENST00000274254 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 NPSP0C0P6 89 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 MRPS36P82909 103 aaKnown RBP11.6□□□□□ -0.55
SKP2-201ENST00000274254 PDZD11Q5EBL8 140 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 Q6ZR54 194 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 ERASQ7Z444 233 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 TIMM17AQ99595 171 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 Q6ZUT4 128 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
SKP2-201ENST00000274254 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
SKP2-201ENST00000274254 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
SKP2-201ENST00000274254 SACSQ9NZJ4 4579 aa11.59□□□□□ -0.55
SKP2-201ENST00000274254 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
SKP2-201ENST00000274254 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
SKP2-201ENST00000274254 SCGB3A1Q96QR1 104 aa11.59□□□□□ -0.55
SKP2-201ENST00000274254 ENHOQ6UWT2 76 aa11.58□□□□□ -0.56
SKP2-201ENST00000274254 M0R2N4 97 aa11.57□□□□□ -0.56
SKP2-201ENST00000274254 TMEM141Q96I45 108 aa11.57□□□□□ -0.56
SKP2-201ENST00000274254 REG3AQ06141 175 aa11.56□□□□□ -0.56
SKP2-201ENST00000274254 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
SKP2-201ENST00000274254 CLPSL2Q6UWE3 100 aa11.56□□□□□ -0.56
SKP2-201ENST00000274254 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
SKP2-201ENST00000274254 TRAV8-3A0A0A6YYJ7 113 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
SKP2-201ENST00000274254 ATP5LO75964 103 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 CRPP02741 224 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 S100A6P06703 90 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 Q6ZN92 141 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 LINC00173Q6ZV60 143 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 AMELXQ99217 191 aa11.55□□□□□ -0.56
SKP2-201ENST00000274254 TMA7Q9Y2S6 64 aaKnown RBP11.55□□□□□ -0.56
SKP2-201ENST00000274254 KMT2CQ8NEZ4 4911 aaKnown RBP11.54□□□□□ -0.56
SKP2-201ENST00000274254 MIAQ16674 131 aa11.54□□□□□ -0.56
SKP2-201ENST00000274254 LEPROTL1O95214 131 aa11.53□□□□□ -0.56
SKP2-201ENST00000274254 TEX43Q6ZNM6 134 aa11.53□□□□□ -0.56
SKP2-201ENST00000274254 BAALCQ8WXS3 180 aa11.53□□□□□ -0.56
SKP2-201ENST00000274254 VCX2Q9H322 139 aa11.53□□□□□ -0.56
SKP2-201ENST00000274254 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
SKP2-201ENST00000274254 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
SKP2-201ENST00000274254 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
SKP2-201ENST00000274254 PACRGQ96M98 296 aaPredicted RBP11.52□□□□□ -0.57
SKP2-201ENST00000274254 Q9HAA7 133 aa11.52□□□□□ -0.57
SKP2-201ENST00000274254 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
SKP2-201ENST00000274254 HIST3H2BBQ8N257 126 aa11.51□□□□□ -0.57
SKP2-201ENST00000274254 HSPB8Q9UJY1 196 aa11.51□□□□□ -0.57
SKP2-201ENST00000274254 HYDINQ4G0P3 5121 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 IFITM10A6NMD0 228 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 FABP4P15090 132 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
SKP2-201ENST00000274254 PMVKQ15126 192 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 C6orf223Q8N319 242 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 CST9LQ9H4G1 147 aa11.5□□□□□ -0.57
SKP2-201ENST00000274254 CCL25O15444 150 aa11.49□□□□□ -0.57
SKP2-201ENST00000274254 UBE2D1P51668 147 aa11.49□□□□□ -0.57
SKP2-201ENST00000274254 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
SKP2-201ENST00000274254 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
SKP2-201ENST00000274254 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
SKP2-201ENST00000274254 IGLV10-54A0A075B6I4 117 aa11.48□□□□□ -0.57
SKP2-201ENST00000274254 SS18Q15532 418 aa11.48□□□□□ -0.57
SKP2-201ENST00000274254 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
SKP2-201ENST00000274254 RMI2Q96E14 147 aa11.48□□□□□ -0.57
SKP2-201ENST00000274254 C1orf43Q9BWL3 253 aa11.48□□□□□ -0.57
SKP2-201ENST00000274254 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
SKP2-201ENST00000274254 PRSS29PA6NIE9 313 aa11.47□□□□□ -0.57
SKP2-201ENST00000274254 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
SKP2-201ENST00000274254 PRSS1P07477 247 aa11.46□□□□□ -0.57
SKP2-201ENST00000274254 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.57
SKP2-201ENST00000274254 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.57
SKP2-201ENST00000274254 COX11Q9Y6N1 276 aa11.46□□□□□ -0.57
SKP2-201ENST00000274254 TRAV12-1A0A0B4J245 112 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 S100A2P29034 98 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 LINC00242Q5T6M2 205 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 XCL1P47992 114 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 MAP1LC3CQ9BXW4 147 aa11.45□□□□□ -0.58
SKP2-201ENST00000274254 CD164L2Q6UWJ8 174 aa11.44□□□□□ -0.58
SKP2-201ENST00000274254 MAPKAPK5-AS1Q8N8E1 139 aa11.44□□□□□ -0.58
SKP2-201ENST00000274254 RYR2Q92736 4967 aa11.43□□□□□ -0.58
SKP2-201ENST00000274254 FOXI1Q12951 378 aa11.43□□□□□ -0.58
SKP2-201ENST00000274254 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 RTL8CO15255 209 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 SEC11AP67812 179 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 COX6A2Q02221 97 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
SKP2-201ENST00000274254 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms