RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 IGLV3-9A0A075B6K5 115 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 NCR3O14931 201 aa6.7□□□□□ -1.34
PDGFC-201ENST00000274071 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
PDGFC-201ENST00000274071 TMEM89A2RUT3 159 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 CFHR3Q02985 330 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 LY6G5BQ8NDX9 201 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-201ENST00000274071 SOCS3O14543 225 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 RNASE13Q5GAN3 156 aaKnown RBP6.69□□□□□ -1.34
PDGFC-201ENST00000274071 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
PDGFC-201ENST00000274071 A0A087WYN8 130 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 CD164Q04900 197 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 LYPD2Q6UXB3 125 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 Q6ZRU5 148 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 MRPL53Q96EL3 112 aaKnown RBP6.68□□□□□ -1.34
PDGFC-201ENST00000274071 IGHV3-49A0A0A0MS15 119 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 IGLV1-47P01700 117 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 LENEPQ9Y5L5 61 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 NBASA2RRP1 2371 aa6.68□□□□□ -1.34
PDGFC-201ENST00000274071 NDUFA1O15239 70 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 CD28P10747 220 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 MOB4Q9Y3A3 225 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 ATRXP46100 2492 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 SAA4P35542 130 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 FAM74A4Q5TZK3 123 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
PDGFC-201ENST00000274071 M0QY20 66 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 BSPH1Q075Z2 132 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 S100A7L2Q5SY68 101 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 PKDREJQ9NTG1 2253 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 NDUFB3O43676 98 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 BLCAPP62952 87 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 PAX4O43316 350 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 DEFB1P60022 68 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 PIK3CD-AS1Q5SR53 167 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 RNF5Q99942 180 aa6.66□□□□□ -1.34
PDGFC-201ENST00000274071 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
PDGFC-201ENST00000274071 BCE1O60756 84 aa6.65□□□□□ -1.35
PDGFC-201ENST00000274071 Q9H8V8 135 aa6.65□□□□□ -1.35
PDGFC-201ENST00000274071 LRBAP50851 2863 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 ABCA4P78363 2273 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 C15orf32Q32M92 178 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 CDKN2A-AS1Q9UH64 79 aa6.64□□□□□ -1.35
PDGFC-201ENST00000274071 NDUFC1O43677 76 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-201ENST00000274071 UNQ9165/PRO28630Q6UXU0 137 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 IBA57-AS1B1ANH7 110 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 SLPIP03973 132 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-201ENST00000274071 FAM110DQ8TAY7 271 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-201ENST00000274071 ITLN2Q8WWU7 325 aaPredicted RBP6.63□□□□□ -1.35
PDGFC-201ENST00000274071 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 U3KQE9 123 aa6.63□□□□□ -1.35
PDGFC-201ENST00000274071 COX7A1P24310 79 aa6.62□□□□□ -1.35
PDGFC-201ENST00000274071 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
PDGFC-201ENST00000274071 SVEP1Q4LDE5 3571 aa6.62□□□□□ -1.35
PDGFC-201ENST00000274071 LECT2O14960 151 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 C11orf72Q8NBR9 251 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 CCL17Q92583 94 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 A0A087WZ39 114 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 E7EQL1 145 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
PDGFC-201ENST00000274071 F6UB75 175 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 PF4P02776 101 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 DCHS2Q6V1P9 2916 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 NPBQ8NG41 125 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 ANKHD1Q8IWZ3 2542 aaKnown RBP6.6□□□□□ -1.35
PDGFC-201ENST00000274071 COL6A6A6NMZ7 2263 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 MIFP14174 115 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 LINC01560Q8TB33 94 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 KLK9Q9UKQ9 250 aa6.6□□□□□ -1.35
PDGFC-201ENST00000274071 H0YGX0 51 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 LAMTOR3Q9UHA4 124 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 CRPP02741 224 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 GRNP28799 593 aaKnown RBP6.59□□□□□ -1.35
PDGFC-201ENST00000274071 ESRGQ1W209 222 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
PDGFC-201ENST00000274071 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 COX6A2Q02221 97 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 TM2D3Q9BRN9 247 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 ITPR1Q14643 2758 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
PDGFC-201ENST00000274071 RPL36AP83881 106 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms