RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 GAGE2BQ13066 116 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 GAGE2EQ4V326 116 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 GAGE2DQ9UEU5 116 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 K7EQD1 137 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
CNOT9-201ENST00000273064 POLR2KP53803 58 aaKnown RBP10.74□□□□□ -0.69
CNOT9-201ENST00000273064 SS18Q15532 418 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 CUBNO60494 3623 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
CNOT9-201ENST00000273064 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
CNOT9-201ENST00000273064 INAFM1C9JVW0 142 aa10.73□□□□□ -0.69
CNOT9-201ENST00000273064 ANAPC13Q9BS18 74 aa10.73□□□□□ -0.69
CNOT9-201ENST00000273064 HERVK_113P63121 156 aa10.73□□□□□ -0.69
CNOT9-201ENST00000273064 RBMY1BA6NDE4 496 aaKnown RBP10.73□□□□□ -0.69
CNOT9-201ENST00000273064 RBMY1EA6NEQ0 496 aaKnown RBP10.73□□□□□ -0.69
CNOT9-201ENST00000273064 RBMY1DP0C7P1 496 aaKnown RBP10.73□□□□□ -0.69
CNOT9-201ENST00000273064 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
CNOT9-201ENST00000273064 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
CNOT9-201ENST00000273064 CRIP2P52943 208 aaPredicted RBP10.73□□□□□ -0.69
CNOT9-201ENST00000273064 LINC01006Q8NI28 216 aa10.73□□□□□ -0.69
CNOT9-201ENST00000273064 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
CNOT9-201ENST00000273064 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
CNOT9-201ENST00000273064 GAGE2AQ6NT46 116 aa10.72□□□□□ -0.69
CNOT9-201ENST00000273064 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
CNOT9-201ENST00000273064 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
CNOT9-201ENST00000273064 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
CNOT9-201ENST00000273064 PPDPFLQ8WWR9 84 aa10.71□□□□□ -0.69
CNOT9-201ENST00000273064 TSHBP01222 138 aa10.71□□□□□ -0.69
CNOT9-201ENST00000273064 INSL3P51460 131 aa10.71□□□□□ -0.69
CNOT9-201ENST00000273064 FBN2P35556 2912 aa10.71□□□□□ -0.7
CNOT9-201ENST00000273064 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.7
CNOT9-201ENST00000273064 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.7
CNOT9-201ENST00000273064 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.7
CNOT9-201ENST00000273064 SOCS3O14543 225 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 TCL1BO95988 128 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 CSMD1Q96PZ7 3565 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 SETXQ7Z333 2677 aaKnown RBP10.7□□□□□ -0.7
CNOT9-201ENST00000273064 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 LGALS9O00182 355 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
CNOT9-201ENST00000273064 RBX1P62877 108 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 ODF3L2Q3SX64 289 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 CELSR2Q9HCU4 2923 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 TMEM89A2RUT3 159 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 IGLV2-18A0A075B6J9 118 aa10.69□□□□□ -0.7
CNOT9-201ENST00000273064 Q6ZSN1 163 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 ANKRD29Q8N6D5 301 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 IGHV4-4A0A075B6R2 117 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 ZFAND6Q6FIF0 208 aa10.68□□□□□ -0.7
CNOT9-201ENST00000273064 PIK3CD-AS1Q5SR53 167 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 Q9HAA7 133 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
CNOT9-201ENST00000273064 COL6A5A8TX70 2615 aa10.67□□□□□ -0.7
CNOT9-201ENST00000273064 SVEP1Q4LDE5 3571 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 TRAV26-1A0A087WT03 109 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 MIR7-3HGQ8N6C7 128 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
CNOT9-201ENST00000273064 C16orf74Q96GX8 76 aa10.65□□□□□ -0.7
CNOT9-201ENST00000273064 HRNRQ86YZ3 2850 aaPredicted RBP10.65□□□□□ -0.7
CNOT9-201ENST00000273064 LINC01620Q4KN68 170 aa10.65□□□□□ -0.7
CNOT9-201ENST00000273064 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
CNOT9-201ENST00000273064 LAMTOR3Q9UHA4 124 aa10.65□□□□□ -0.7
CNOT9-201ENST00000273064 HIST1H4AP62805 103 aaKnown RBP10.64□□□□□ -0.71
CNOT9-201ENST00000273064 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
CNOT9-201ENST00000273064 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
CNOT9-201ENST00000273064 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
CNOT9-201ENST00000273064 G3V4G9 280 aa10.64□□□□□ -0.71
CNOT9-201ENST00000273064 FAM222AQ5U5X8 452 aa10.64□□□□□ -0.71
CNOT9-201ENST00000273064 EDA2RQ9HAV5 297 aa10.64□□□□□ -0.71
CNOT9-201ENST00000273064 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
CNOT9-201ENST00000273064 ATP5G1P05496 136 aa10.63□□□□□ -0.71
CNOT9-201ENST00000273064 DAZ2Q13117 558 aaKnown RBP10.63□□□□□ -0.71
CNOT9-201ENST00000273064 DAZ4Q86SG3 579 aaKnown RBP10.63□□□□□ -0.71
CNOT9-201ENST00000273064 DAZ3Q9NR90 486 aaKnown RBP10.63□□□□□ -0.71
CNOT9-201ENST00000273064 FOXI1Q12951 378 aa10.63□□□□□ -0.71
CNOT9-201ENST00000273064 KLK12Q9UKR0 248 aa10.63□□□□□ -0.71
CNOT9-201ENST00000273064 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
CNOT9-201ENST00000273064 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
CNOT9-201ENST00000273064 CELSR1Q9NYQ6 3014 aa10.62□□□□□ -0.71
CNOT9-201ENST00000273064 TEN1Q86WV5 123 aa10.62□□□□□ -0.71
CNOT9-201ENST00000273064 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
CNOT9-201ENST00000273064 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
CNOT9-201ENST00000273064 LINC00694P0DN24 101 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms