RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 GAGE12JA6NER3 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 GAGE7O76087 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 IGHV3-53P01767 116 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 GAGE12FP0CL80 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 GAGE12GP0CL81 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 GAGE12IP0CL82 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 GAGE4Q13068 117 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 C11orf72Q8NBR9 251 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 DGAT2L7PQ6IED9 249 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 Q9H8V8 135 aa17.15■□□□□ 0.34
RETREG2-201ENST00000273048 ZFYVE26Q68DK2 2539 aa17.14■□□□□ 0.33
RETREG2-201ENST00000273048 IGHV3OR16-12A0A075B7B8 117 aa17.14■□□□□ 0.33
RETREG2-201ENST00000273048 NDUFA7O95182 113 aa17.14■□□□□ 0.33
RETREG2-201ENST00000273048 LINC00308Q8TCZ7 52 aa17.14■□□□□ 0.33
RETREG2-201ENST00000273048 ZNF702PQ9H963 129 aa17.14■□□□□ 0.33
RETREG2-201ENST00000273048 HIST2H2BDQ6DRA6 164 aa17.13■□□□□ 0.33
RETREG2-201ENST00000273048 IGLV5-45A0A087WSX0 123 aa17.13■□□□□ 0.33
RETREG2-201ENST00000273048 A8MTW9 85 aa17.13■□□□□ 0.33
RETREG2-201ENST00000273048 TIRAPP58753 221 aa17.13■□□□□ 0.33
RETREG2-201ENST00000273048 ANKRD17O75179 2603 aaKnown RBP17.12■□□□□ 0.33
RETREG2-201ENST00000273048 DEFB121Q5J5C9 76 aa17.11■□□□□ 0.33
RETREG2-201ENST00000273048 VPREB3Q9UKI3 123 aa17.11■□□□□ 0.33
RETREG2-201ENST00000273048 CIRBPQ14011 172 aaKnown RBP17.11■□□□□ 0.33
RETREG2-201ENST00000273048 LINC00694P0DN24 101 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 PIK3CD-AS1Q5SR53 167 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 LINC00242Q5T6M2 205 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 DNAJC30Q96LL9 226 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 SOSTDC1Q6X4U4 206 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 Q8N2B8 174 aa17.1■□□□□ 0.33
RETREG2-201ENST00000273048 MAP6D1Q9H9H5 199 aa17.09■□□□□ 0.33
RETREG2-201ENST00000273048 FAM208BQ5VWN6 2430 aa17.09■□□□□ 0.33
RETREG2-201ENST00000273048 LINC01356Q8N9X3 169 aa17.09■□□□□ 0.33
RETREG2-201ENST00000273048 FAM240AA0A1B0GVK7 77 aa17.08■□□□□ 0.33
RETREG2-201ENST00000273048 IGLV5-39A0A0G2JS06 123 aa17.07■□□□□ 0.32
RETREG2-201ENST00000273048 RS1O15537 224 aa17.07■□□□□ 0.32
RETREG2-201ENST00000273048 BEAN1Q3B7T3 259 aa17.07■□□□□ 0.32
RETREG2-201ENST00000273048 TRAV13-1A0A0B4J241 112 aa17.07■□□□□ 0.32
RETREG2-201ENST00000273048 HERVK_113P63121 156 aa17.06■□□□□ 0.32
RETREG2-201ENST00000273048 MYO9AB2RTY4 2548 aa17.05■□□□□ 0.32
RETREG2-201ENST00000273048 PRB1P04280 392 aa17.05■□□□□ 0.32
RETREG2-201ENST00000273048 MRPL23Q16540 153 aaKnown RBP17.05■□□□□ 0.32
RETREG2-201ENST00000273048 XCL2Q9UBD3 114 aa17.05■□□□□ 0.32
RETREG2-201ENST00000273048 SMIM1B2RUZ4 78 aa17.05■□□□□ 0.32
RETREG2-201ENST00000273048 CHCHD5Q9BSY4 110 aa17.05■□□□□ 0.32
RETREG2-201ENST00000273048 COX7A2LO14548 114 aa17.04■□□□□ 0.32
RETREG2-201ENST00000273048 INSP01308 110 aa17.04■□□□□ 0.32
RETREG2-201ENST00000273048 LRRK2Q5S007 2527 aa17.04■□□□□ 0.32
RETREG2-201ENST00000273048 ZNF462Q96JM2 2506 aa17.03■□□□□ 0.32
RETREG2-201ENST00000273048 C2CD3Q4AC94 2353 aa17.03■□□□□ 0.32
RETREG2-201ENST00000273048 KHDC1LQ5JSQ8 128 aa17.03■□□□□ 0.32
RETREG2-201ENST00000273048 MEIG1Q5JSS6 88 aa17.03■□□□□ 0.32
RETREG2-201ENST00000273048 PRIMA1Q86XR5 153 aa17.02■□□□□ 0.32
RETREG2-201ENST00000273048 Q6YL49 198 aa17.02■□□□□ 0.31
RETREG2-201ENST00000273048 DYNLRB2Q8TF09 96 aa17.01■□□□□ 0.31
RETREG2-201ENST00000273048 TRGV1A0A0A0MS02 117 aa17.01■□□□□ 0.31
RETREG2-201ENST00000273048 SHISA2Q6UWI4 295 aa17.01■□□□□ 0.31
RETREG2-201ENST00000273048 NOTCH3Q9UM47 2321 aa17■□□□□ 0.31
RETREG2-201ENST00000273048 NTM-AS1Q6ZSK4 140 aa17■□□□□ 0.31
RETREG2-201ENST00000273048 A0A096LNT2 108 aa17■□□□□ 0.31
RETREG2-201ENST00000273048 USP24Q9UPU5 2620 aa16.99■□□□□ 0.31
RETREG2-201ENST00000273048 PEMTQ9UBM1 199 aa16.99■□□□□ 0.31
RETREG2-201ENST00000273048 TRBV7-7A0A0K0K1E9 115 aa16.99■□□□□ 0.31
RETREG2-201ENST00000273048 DSCR9P59020 149 aa16.98■□□□□ 0.31
RETREG2-201ENST00000273048 SMCR5Q8TEV8 140 aa16.98■□□□□ 0.31
RETREG2-201ENST00000273048 AKAP9Q99996 3911 aa16.97■□□□□ 0.31
RETREG2-201ENST00000273048 DAZ2Q13117 558 aaKnown RBP16.97■□□□□ 0.31
RETREG2-201ENST00000273048 DAZ4Q86SG3 579 aaKnown RBP16.97■□□□□ 0.31
RETREG2-201ENST00000273048 FAM218AQ96MZ4 157 aa16.97■□□□□ 0.31
RETREG2-201ENST00000273048 DAZ3Q9NR90 486 aaKnown RBP16.97■□□□□ 0.31
RETREG2-201ENST00000273048 CHD6Q8TD26 2715 aa16.97■□□□□ 0.31
RETREG2-201ENST00000273048 ABCA12Q86UK0 2595 aa16.97■□□□□ 0.31
RETREG2-201ENST00000273048 DEFB114Q30KQ6 69 aa16.97■□□□□ 0.31
RETREG2-201ENST00000273048 PTPN13Q12923 2485 aa16.96■□□□□ 0.31
RETREG2-201ENST00000273048 F5H768 121 aa16.96■□□□□ 0.3
RETREG2-201ENST00000273048 J3QLI3 93 aa16.96■□□□□ 0.3
RETREG2-201ENST00000273048 WNK1Q9H4A3 2382 aa16.96■□□□□ 0.3
RETREG2-201ENST00000273048 C1orf158Q8N1D5 194 aa16.95■□□□□ 0.3
RETREG2-201ENST00000273048 C3orf56Q8N813 242 aa16.95■□□□□ 0.3
RETREG2-201ENST00000273048 ZNF469Q96JG9 3925 aaPredicted RBP16.95■□□□□ 0.3
RETREG2-201ENST00000273048 Q96MF0 132 aa16.95■□□□□ 0.3
RETREG2-201ENST00000273048 Q6ZTI0 123 aa16.94■□□□□ 0.3
RETREG2-201ENST00000273048 BAALC-AS2P0C853 105 aa16.94■□□□□ 0.3
RETREG2-201ENST00000273048 RPL36AP83881 106 aaKnown RBP16.94■□□□□ 0.3
RETREG2-201ENST00000273048 FAM19A3Q7Z5A8 133 aa16.94■□□□□ 0.3
RETREG2-201ENST00000273048 RPL36ALQ969Q0 106 aaKnown RBP16.94■□□□□ 0.3
RETREG2-201ENST00000273048 CDC42SE2Q9NRR3 84 aa16.94■□□□□ 0.3
RETREG2-201ENST00000273048 TEX15Q9BXT5 2789 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 FAM236AA0A1B0GUQ0 79 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 FAM236BA0A1B0GV22 79 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 K7EQD1 137 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 ODF3L2Q3SX64 289 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 C22orf24Q9Y442 160 aa16.93■□□□□ 0.3
RETREG2-201ENST00000273048 COPS9Q8WXC6 57 aa16.92■□□□□ 0.3
RETREG2-201ENST00000273048 FSHBP01225 129 aa16.91■□□□□ 0.3
RETREG2-201ENST00000273048 C4orf3Q8WVX3 66 aa16.91■□□□□ 0.3
RETREG2-201ENST00000273048 ACYP1P07311 99 aa16.91■□□□□ 0.3
RETREG2-201ENST00000273048 SMIM20Q8N5G0 67 aa16.91■□□□□ 0.3
RETREG2-201ENST00000273048 Q9HAA7 133 aa16.91■□□□□ 0.3
RETREG2-201ENST00000273048 CSDC2Q9Y534 153 aaKnown RBP16.91■□□□□ 0.3
RETREG2-201ENST00000273048 TRACP01848 142 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms