RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.3■□□□□ 0.36
SH3GL1-201ENST00000269886 SLC25A20O43772 301 aa17.29■□□□□ 0.36
SH3GL1-201ENST00000269886 SCGB1A1P11684 91 aa17.29■□□□□ 0.36
SH3GL1-201ENST00000269886 DGAT2L7PQ6IED9 249 aa17.28■□□□□ 0.36
SH3GL1-201ENST00000269886 WFDC11Q8NEX6 87 aa17.28■□□□□ 0.36
SH3GL1-201ENST00000269886 CLUHP3Q96NS8 147 aa17.28■□□□□ 0.36
SH3GL1-201ENST00000269886 SPANXDQ9BXN6 97 aa17.28■□□□□ 0.36
SH3GL1-201ENST00000269886 SPANXCQ9NY87 97 aa17.28■□□□□ 0.36
SH3GL1-201ENST00000269886 COX6A2Q02221 97 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 ZFAND6Q6FIF0 208 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 TMEM86BQ8N661 226 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 CCL24O00175 119 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 MIAQ16674 131 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 ESM1Q9NQ30 184 aa17.27■□□□□ 0.36
SH3GL1-201ENST00000269886 LINC00694P0DN24 101 aa17.26■□□□□ 0.35
SH3GL1-201ENST00000269886 Q6ZTI0 123 aa17.26■□□□□ 0.35
SH3GL1-201ENST00000269886 IL17DQ8TAD2 202 aa17.26■□□□□ 0.35
SH3GL1-201ENST00000269886 TRIAP1O43715 76 aa17.25■□□□□ 0.35
SH3GL1-201ENST00000269886 DAND5Q8N907 189 aa17.25■□□□□ 0.35
SH3GL1-201ENST00000269886 TRAV25A0A0B4J276 109 aa17.25■□□□□ 0.35
SH3GL1-201ENST00000269886 TMEM101Q96IK0 257 aa17.25■□□□□ 0.35
SH3GL1-201ENST00000269886 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.356e-6■□□□□ 9
SH3GL1-201ENST00000269886 KMT2BQ9UMN6 2715 aaPredicted RBP17.25■□□□□ 0.35
SH3GL1-201ENST00000269886 NDUFA7O95182 113 aa17.24■□□□□ 0.35
SH3GL1-201ENST00000269886 CCDC168Q8NDH2 2452 aa17.24■□□□□ 0.35
SH3GL1-201ENST00000269886 NOTCH3Q9UM47 2321 aa17.23■□□□□ 0.35
SH3GL1-201ENST00000269886 SETD2Q9BYW2 2564 aaPredicted RBP17.23■□□□□ 0.35
SH3GL1-201ENST00000269886 TIRAPP58753 221 aa17.23■□□□□ 0.35
SH3GL1-201ENST00000269886 IGLV5-45A0A087WSX0 123 aa17.22■□□□□ 0.35
SH3GL1-201ENST00000269886 TRBV30A0A0K0K1B3 111 aa17.22■□□□□ 0.35
SH3GL1-201ENST00000269886 CITED2Q99967 270 aaPredicted RBP17.22■□□□□ 0.35
SH3GL1-201ENST00000269886 ATXN8Q156A1 80 aa17.22■□□□□ 0.35
SH3GL1-201ENST00000269886 NTM-AS1Q6ZSK4 140 aa17.21■□□□□ 0.35
SH3GL1-201ENST00000269886 LINC00242Q5T6M2 205 aa17.21■□□□□ 0.35
SH3GL1-201ENST00000269886 FLNAP21333 2647 aaKnown RBP17.21■□□□□ 0.34
SH3GL1-201ENST00000269886 LINC01620Q4KN68 170 aa17.2■□□□□ 0.34
SH3GL1-201ENST00000269886 K7EQD1 137 aa17.2■□□□□ 0.34
SH3GL1-201ENST00000269886 ICOSQ9Y6W8 199 aa17.2■□□□□ 0.34
SH3GL1-201ENST00000269886 MT-ATP8P03928 68 aa17.19■□□□□ 0.34
SH3GL1-201ENST00000269886 XGP55808 180 aa17.19■□□□□ 0.34
SH3GL1-201ENST00000269886 RPL36AP83881 106 aaKnown RBP17.19■□□□□ 0.34
SH3GL1-201ENST00000269886 RPL36ALQ969Q0 106 aaKnown RBP17.19■□□□□ 0.34
SH3GL1-201ENST00000269886 PLA2G2AP14555 144 aa17.19■□□□□ 0.34
SH3GL1-201ENST00000269886 NDUFA1O15239 70 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 WFDC10AQ9H1F0 79 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 NOP10Q9NPE3 64 aaKnown RBP17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 GAGE12JA6NER3 117 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 GAGE4Q13068 117 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 GAGE5Q13069 117 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 ZNF625Q96I27 306 aaPredicted RBP17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 JMJD1CQ15652 2540 aa17.18■□□□□ 0.34
SH3GL1-201ENST00000269886 TRAV13-1A0A0B4J241 112 aa17.17■□□□□ 0.34
SH3GL1-201ENST00000269886 HIST2H2BCQ6DN03 193 aa17.17■□□□□ 0.34
SH3GL1-201ENST00000269886 SETXQ7Z333 2677 aaKnown RBP17.17■□□□□ 0.34
SH3GL1-201ENST00000269886 HERVK_113P63121 156 aa17.17■□□□□ 0.34
SH3GL1-201ENST00000269886 Q9H8V8 135 aa17.16■□□□□ 0.34
SH3GL1-201ENST00000269886 YAE1D1Q9NRH1 226 aa17.16■□□□□ 0.34
SH3GL1-201ENST00000269886 M0QXV9 152 aa17.16■□□□□ 0.34
SH3GL1-201ENST00000269886 TIMM17BO60830 172 aa17.16■□□□□ 0.34
SH3GL1-201ENST00000269886 GIG44P09565 113 aaPredicted RBP17.16■□□□□ 0.34
SH3GL1-201ENST00000269886 C2CD3Q4AC94 2353 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 TRBV10-1A0A0K0K1A3 114 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 A0A0U1RRA0 63 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 NTN5Q8WTR8 489 aaPredicted RBP17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 TRAV4A0A0B4J268 109 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 IGLV5-39A0A0G2JS06 123 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 J3QKU1 62 aa17.15■□□□□ 0.34
SH3GL1-201ENST00000269886 TENM4Q6N022 2769 aa17.14■□□□□ 0.33
SH3GL1-201ENST00000269886 DAZ2Q13117 558 aaKnown RBP17.14■□□□□ 0.33
SH3GL1-201ENST00000269886 DAZ4Q86SG3 579 aaKnown RBP17.14■□□□□ 0.33
SH3GL1-201ENST00000269886 DAZ3Q9NR90 486 aaKnown RBP17.14■□□□□ 0.33
SH3GL1-201ENST00000269886 RPL13AP40429 203 aaKnown RBP17.13■□□□□ 0.33
SH3GL1-201ENST00000269886 CLEC2BQ92478 149 aa17.13■□□□□ 0.33
SH3GL1-201ENST00000269886 SMIM1B2RUZ4 78 aa17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 IFITM1P13164 125 aa17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 LINC01006Q8NI28 216 aa17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 RPL35AP18077 110 aaKnown RBP17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 RNF183Q96D59 192 aa17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 CSDC2Q9Y534 153 aaKnown RBP17.12■□□□□ 0.33
SH3GL1-201ENST00000269886 TRBV10-2A0A0K0K1G8 114 aa17.11■□□□□ 0.33
SH3GL1-201ENST00000269886 CDC42SE2Q9NRR3 84 aa17.11■□□□□ 0.33
SH3GL1-201ENST00000269886 CIRBPQ14011 172 aaKnown RBP17.11■□□□□ 0.33
SH3GL1-201ENST00000269886 TEX29Q8N6K0 151 aa17.11■□□□□ 0.33
SH3GL1-201ENST00000269886 TEX49A0A1B0GTD5 131 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 PLAC8L1A1L4L8 177 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 GAGE7O76087 117 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 GAGE12FP0CL80 117 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 GAGE12GP0CL81 117 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 GAGE12IP0CL82 117 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 LOC100131303A0A0U1RQF7 123 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 COX6CP09669 75 aa17.1■□□□□ 0.33
SH3GL1-201ENST00000269886 FAM19A3Q7Z5A8 133 aa17.09■□□□□ 0.33
SH3GL1-201ENST00000269886 LINC00308Q8TCZ7 52 aa17.09■□□□□ 0.33
SH3GL1-201ENST00000269886 ACANP16112 2415 aa17.09■□□□□ 0.33
SH3GL1-201ENST00000269886 H7C423 109 aa17.08■□□□□ 0.33
SH3GL1-201ENST00000269886 TRGV2A0A075B6R0 118 aa17.08■□□□□ 0.32
SH3GL1-201ENST00000269886 CIDEAO60543 219 aa17.07■□□□□ 0.32
SH3GL1-201ENST00000269886 F5H768 121 aa17.06■□□□□ 0.32
SH3GL1-201ENST00000269886 C2orf82Q6UX34 121 aa17.06■□□□□ 0.32
SH3GL1-201ENST00000269886 TMEM262E9PQX1 116 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms