RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCDC179H3BU77 68 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 IGHV3-53P01767 116 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 C14orf178Q8N769 122 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 RASL10AQ92737 203 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 IGHV4-4A0A075B6R2 117 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 IGHV3-73A0A0B4J1V6 119 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 POM121L12Q8N7R1 296 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 SPANXCQ9NY87 97 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 HHLA3Q9XRX5 114 aa19.53■□□□□ 0.72
SMARCD3-201ENST00000262188 SNCGO76070 127 aa19.52■□□□□ 0.72
SMARCD3-201ENST00000262188 CARD19Q96LW7 228 aa19.52■□□□□ 0.72
SMARCD3-201ENST00000262188 IFI27P40305 119 aaPredicted RBP19.52■□□□□ 0.71
SMARCD3-201ENST00000262188 FAM74A4Q5TZK3 123 aa19.51■□□□□ 0.71
SMARCD3-201ENST00000262188 C11orf68Q9H3H3 251 aaKnown RBP19.51■□□□□ 0.71
SMARCD3-201ENST00000262188 NACAE9PAV3 2078 aa19.51■□□□□ 0.71
SMARCD3-201ENST00000262188 TRBV20-1A0A075B6N2 111 aa19.5■□□□□ 0.71
SMARCD3-201ENST00000262188 TRGV2A0A075B6R0 118 aa19.5■□□□□ 0.71
SMARCD3-201ENST00000262188 LINC01546A6NGU7 62 aa19.49■□□□□ 0.71
SMARCD3-201ENST00000262188 IGKCP01834 107 aa19.49■□□□□ 0.71
SMARCD3-201ENST00000262188 SPANXDQ9BXN6 97 aa19.49■□□□□ 0.71
SMARCD3-201ENST00000262188 LYRM9A8MSI8 78 aa19.48■□□□□ 0.71
SMARCD3-201ENST00000262188 ATP5LO75964 103 aa19.48■□□□□ 0.71
SMARCD3-201ENST00000262188 SPART-AS1P0CW21 52 aa19.48■□□□□ 0.71
SMARCD3-201ENST00000262188 DNAJC30Q96LL9 226 aa19.48■□□□□ 0.71
SMARCD3-201ENST00000262188 LINC00612Q8N6U2 182 aa19.48■□□□□ 0.71
SMARCD3-201ENST00000262188 CRYGDP07320 174 aa19.47■□□□□ 0.71
SMARCD3-201ENST00000262188 CSDC2Q9Y534 153 aaKnown RBP19.47■□□□□ 0.71
SMARCD3-201ENST00000262188 STAB2Q8WWQ8 2551 aa19.47■□□□□ 0.71
SMARCD3-201ENST00000262188 TRBV7-3A0A075B6L6 115 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 IGKV2D-26A0A0A0MRZ7 120 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 A8MWV9 139 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 NANOS2P60321 138 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 DAD1P61803 113 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 MRPL23Q16540 153 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 AMN1Q8IY45 258 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 ORMDL3Q8N138 153 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 KIF25-AS1Q9Y6Z4 181 aa19.46■□□□□ 0.71
SMARCD3-201ENST00000262188 HIST1H4GQ99525 98 aa19.45■□□□□ 0.7
SMARCD3-201ENST00000262188 RS1O15537 224 aa19.44■□□□□ 0.7
SMARCD3-201ENST00000262188 DPM2O94777 84 aa19.44■□□□□ 0.7
SMARCD3-201ENST00000262188 MGPP08493 103 aa19.44■□□□□ 0.7
SMARCD3-201ENST00000262188 LINC00315P59091 139 aa19.43■□□□□ 0.7
SMARCD3-201ENST00000262188 UBE2D3P61077 147 aa19.43■□□□□ 0.7
SMARCD3-201ENST00000262188 UBE2D2P62837 147 aa19.43■□□□□ 0.7
SMARCD3-201ENST00000262188 Q6ZSN1 163 aa19.43■□□□□ 0.7
SMARCD3-201ENST00000262188 TRAV26-2A0A0B4J265 109 aa19.42■□□□□ 0.7
SMARCD3-201ENST00000262188 MEIG1Q5JSS6 88 aa19.42■□□□□ 0.7
SMARCD3-201ENST00000262188 TRAV4A0A0B4J268 109 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 HTN3P15516 51 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 PIK3CD-AS1Q5SR53 167 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 C11orf45Q8TAV5 145 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 RNF185Q96GF1 192 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 PPDPFQ9H3Y8 114 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 GAS8-AS1O95177 125 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 Q6ZTC4 211 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 DPH3P1Q9H4G8 78 aa19.41■□□□□ 0.7
SMARCD3-201ENST00000262188 MYMXA0A1B0GTQ4 84 aa19.4■□□□□ 0.7
SMARCD3-201ENST00000262188 ZNF56Q15929 161 aa19.39■□□□□ 0.7
SMARCD3-201ENST00000262188 FAM104BQ5XKR9 115 aa19.39■□□□□ 0.7
SMARCD3-201ENST00000262188 SMKR1H3BMG3 65 aa19.39■□□□□ 0.69
SMARCD3-201ENST00000262188 F5H697 171 aa19.38■□□□□ 0.69
SMARCD3-201ENST00000262188 Q9UF83 564 aa19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 TGP01266 2768 aa19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 D6R8Y8 96 aa19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 GATA1P15976 413 aaPredicted RBP19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 LINC01600Q96MT4 127 aa19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 EDA2RQ9HAV5 297 aa19.37■□□□□ 0.69
SMARCD3-201ENST00000262188 P0DMU3 169 aa19.36■□□□□ 0.69
SMARCD3-201ENST00000262188 FAM231AP0DMU4 169 aa19.36■□□□□ 0.69
SMARCD3-201ENST00000262188 FAM231CP0DMU5 169 aa19.36■□□□□ 0.69
SMARCD3-201ENST00000262188 FCER1GP30273 86 aa19.36■□□□□ 0.69
SMARCD3-201ENST00000262188 MRPL51Q4U2R6 128 aaKnown RBP19.36■□□□□ 0.69
SMARCD3-201ENST00000262188 SCGB1C2P0DMR2 95 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 FHL2Q14192 279 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 ZC2HC1BQ5TFG8 222 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 NPYP01303 97 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 PSMB2P49721 201 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 SUMO4Q6EEV6 95 aa19.35■□□□□ 0.69
SMARCD3-201ENST00000262188 KIR2DL4Q99706 377 aa19.34■□□□□ 0.69
SMARCD3-201ENST00000262188 TRGV4A0A0C4DH28 118 aa19.33■□□□□ 0.69
SMARCD3-201ENST00000262188 ATP5G1P05496 136 aa19.33■□□□□ 0.68
SMARCD3-201ENST00000262188 UBE2D1P51668 147 aa19.33■□□□□ 0.68
SMARCD3-201ENST00000262188 LOC389332A0A1B0GUA5 103 aa19.32■□□□□ 0.68
SMARCD3-201ENST00000262188 F5H768 121 aa19.32■□□□□ 0.68
SMARCD3-201ENST00000262188 A0A1B0GX51 115 aa19.32■□□□□ 0.68
SMARCD3-201ENST00000262188 ZFP2Q6ZN57 461 aa19.32■□□□□ 0.68
SMARCD3-201ENST00000262188 NXT2Q9NPJ8 142 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-201ENST00000262188 ANKRD29Q8N6D5 301 aa19.31■□□□□ 0.68
SMARCD3-201ENST00000262188 PLNP26678 52 aa19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 SLC25A29Q8N8R3 303 aa19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 RPL39LQ96EH5 51 aaKnown RBP19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 LOC100131303A0A0U1RQF7 123 aa19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 PRSS1P07477 247 aa19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 TTTY13Q9BZ97 58 aa19.3■□□□□ 0.68
SMARCD3-201ENST00000262188 A0A0J9YY99 117 aa19.28■□□□□ 0.68
SMARCD3-201ENST00000262188 MAPKAPK5-AS1Q8N8E1 139 aa19.28■□□□□ 0.68
SMARCD3-201ENST00000262188 M0QY20 66 aa19.27■□□□□ 0.68
SMARCD3-201ENST00000262188 CKS2P33552 79 aa19.27■□□□□ 0.68
SMARCD3-201ENST00000262188 RPS28P62857 69 aaKnown RBP19.26■□□□□ 0.67
SMARCD3-201ENST00000262188 DEFB131BA0A096LNP1 70 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms