RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SPANXA1Q9NS26 97 aa11.8□□□□□ -0.52
TM9SF1-201ENST00000261789 FLNAP21333 2647 aaKnown RBP11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 NDUFA7O95182 113 aa11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 TRIAP1O43715 76 aa11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 COX6A2Q02221 97 aa11.79□□□□□ -0.52
TM9SF1-201ENST00000261789 XGP55808 180 aa11.78□□□□□ -0.52
TM9SF1-201ENST00000261789 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
TM9SF1-201ENST00000261789 CRYBA4P53673 196 aa11.78□□□□□ -0.52
TM9SF1-201ENST00000261789 BEAN1Q3B7T3 259 aa11.78□□□□□ -0.52
TM9SF1-201ENST00000261789 RS1O15537 224 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 C1orf158Q8N1D5 194 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 PIK3CD-AS1Q5SR53 167 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 STHQ8IWL8 128 aa11.77□□□□□ -0.53
TM9SF1-201ENST00000261789 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
TM9SF1-201ENST00000261789 TENM4Q6N022 2769 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 ACANP16112 2415 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 MIAQ16674 131 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 TMEM101Q96IK0 257 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 Q6ZTI0 123 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 DNAJC30Q96LL9 226 aa11.75□□□□□ -0.53
TM9SF1-201ENST00000261789 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
TM9SF1-201ENST00000261789 SPANXDQ9BXN6 97 aa11.74□□□□□ -0.53
TM9SF1-201ENST00000261789 SPANXCQ9NY87 97 aa11.74□□□□□ -0.53
TM9SF1-201ENST00000261789 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
TM9SF1-201ENST00000261789 MTORP42345 2549 aa11.73□□□□□ -0.53
TM9SF1-201ENST00000261789 A0A1B0GV72 72 aa11.73□□□□□ -0.53
TM9SF1-201ENST00000261789 ATXN8Q156A1 80 aa11.73□□□□□ -0.53
TM9SF1-201ENST00000261789 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
TM9SF1-201ENST00000261789 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
TM9SF1-201ENST00000261789 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
TM9SF1-201ENST00000261789 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
TM9SF1-201ENST00000261789 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
TM9SF1-201ENST00000261789 CLEC2BQ92478 149 aa11.72□□□□□ -0.53
TM9SF1-201ENST00000261789 TEX49A0A1B0GTD5 131 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 NTM-AS1Q6ZSK4 140 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 WFDC11Q8NEX6 87 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 WFDC10AQ9H1F0 79 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 ESM1Q9NQ30 184 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 CCL24O00175 119 aa11.71□□□□□ -0.53
TM9SF1-201ENST00000261789 CKS1BP61024 79 aa11.7□□□□□ -0.54
TM9SF1-201ENST00000261789 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
TM9SF1-201ENST00000261789 GAGE4Q13068 117 aa11.7□□□□□ -0.54
TM9SF1-201ENST00000261789 GAGE5Q13069 117 aa11.7□□□□□ -0.54
TM9SF1-201ENST00000261789 Q9H8V8 135 aa11.7□□□□□ -0.54
TM9SF1-201ENST00000261789 HIST2H2BCQ6DN03 193 aa11.69□□□□□ -0.54
TM9SF1-201ENST00000261789 NOP10Q9NPE3 64 aaKnown RBP11.69□□□□□ -0.54
TM9SF1-201ENST00000261789 TIRAPP58753 221 aa11.69□□□□□ -0.54
TM9SF1-201ENST00000261789 CITED2Q99967 270 aaPredicted RBP11.69□□□□□ -0.54
TM9SF1-201ENST00000261789 IGLV5-45A0A087WSX0 123 aa11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 PLA2G2AP14555 144 aa11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 K7EQD1 137 aa11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 NDUFA1O15239 70 aa11.68□□□□□ -0.54
TM9SF1-201ENST00000261789 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
TM9SF1-201ENST00000261789 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
TM9SF1-201ENST00000261789 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
TM9SF1-201ENST00000261789 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
TM9SF1-201ENST00000261789 LOC100131303A0A0U1RQF7 123 aa11.66□□□□□ -0.54
TM9SF1-201ENST00000261789 H7C423 109 aa11.66□□□□□ -0.54
TM9SF1-201ENST00000261789 GIG44P09565 113 aaPredicted RBP11.66□□□□□ -0.54
TM9SF1-201ENST00000261789 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
TM9SF1-201ENST00000261789 SMIM1B2RUZ4 78 aa11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 HERVK_113P63121 156 aa11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 RPL35AP18077 110 aaKnown RBP11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 C2orf82Q6UX34 121 aa11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 YAE1D1Q9NRH1 226 aa11.65□□□□□ -0.54
TM9SF1-201ENST00000261789 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 M0QXV9 152 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 LINC00308Q8TCZ7 52 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 TIMM17BO60830 172 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 GAGE7O76087 117 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 COX6CP09669 75 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
TM9SF1-201ENST00000261789 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
TM9SF1-201ENST00000261789 J3QKU1 62 aa11.63□□□□□ -0.55
TM9SF1-201ENST00000261789 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
TM9SF1-201ENST00000261789 CIRBPQ14011 172 aaKnown RBP11.63□□□□□ -0.55
TM9SF1-201ENST00000261789 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 TMEM262E9PQX1 116 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 IFITM1P13164 125 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms