RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 C3orf84H3BNL1 204 aa8.96□□□□□ -0.97
COL8A1-201ENST00000261037 TRIAP1O43715 76 aa8.96□□□□□ -0.97
COL8A1-201ENST00000261037 PRR9Q5T870 116 aa8.96□□□□□ -0.97
COL8A1-201ENST00000261037 LINC00643Q86TS7 51 aa8.96□□□□□ -0.97
COL8A1-201ENST00000261037 MIFP14174 115 aa8.96□□□□□ -0.98
COL8A1-201ENST00000261037 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
COL8A1-201ENST00000261037 CLUHP3Q96NS8 147 aa8.95□□□□□ -0.98
COL8A1-201ENST00000261037 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
COL8A1-201ENST00000261037 SHISA2Q6UWI4 295 aa8.95□□□□□ -0.98
COL8A1-201ENST00000261037 ALPK3Q96L96 1907 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 MED13LQ71F56 2210 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 C10orf142B7Z368 130 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 FREM1Q5H8C1 2179 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 EBI3Q14213 229 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 C6orf99Q4VX62 202 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 TRBV6-4A0A1B0GX49 114 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
COL8A1-201ENST00000261037 SPANXB1Q9NS25 103 aaPredicted RBP8.94□□□□□ -0.98
COL8A1-201ENST00000261037 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
COL8A1-201ENST00000261037 TSHBP01222 138 aa8.93□□□□□ -0.98
COL8A1-201ENST00000261037 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
COL8A1-201ENST00000261037 U3KQK5 164 aa8.93□□□□□ -0.98
COL8A1-201ENST00000261037 TRAV10A0A0B4J240 114 aa8.92□□□□□ -0.98
COL8A1-201ENST00000261037 EDN2P20800 178 aa8.92□□□□□ -0.98
COL8A1-201ENST00000261037 NOTCH3Q9UM47 2321 aa8.92□□□□□ -0.98
COL8A1-201ENST00000261037 LINC01006Q8NI28 216 aa8.92□□□□□ -0.98
COL8A1-201ENST00000261037 PSMG3-AS1Q96PY0 264 aa8.92□□□□□ -0.98
COL8A1-201ENST00000261037 RBX1P62877 108 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 KPRPQ5T749 579 aaPredicted RBP8.91□□□□□ -0.98
COL8A1-201ENST00000261037 LY6G6CO95867 125 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 RNASE3P12724 160 aaKnown RBP8.91□□□□□ -0.98
COL8A1-201ENST00000261037 NCOA6Q14686 2063 aaPredicted RBP8.91□□□□□ -0.98
COL8A1-201ENST00000261037 KIR2DL5BQ8NHK3 375 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
COL8A1-201ENST00000261037 CCKP06307 115 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 NDUFV3P56181 108 aaKnown RBP8.91□□□□□ -0.98
COL8A1-201ENST00000261037 OTOGLQ3ZCN5 2332 aa8.91□□□□□ -0.98
COL8A1-201ENST00000261037 C7orf33Q8WU49 177 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 SMR3AQ99954 134 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 UBE2D1P51668 147 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 CDSNQ15517 529 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 SHANK1Q9Y566 2161 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 GAS8-AS1O95177 125 aa8.9□□□□□ -0.98
COL8A1-201ENST00000261037 TRBV6-5A0A0K0K1A5 114 aa8.9□□□□□ -0.99
COL8A1-201ENST00000261037 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 NRACQ8N912 160 aa8.89□□□□□ -0.99
COL8A1-201ENST00000261037 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
COL8A1-201ENST00000261037 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
COL8A1-201ENST00000261037 KIAA1549Q9HCM3 1950 aa8.88□□□□□ -0.99
COL8A1-201ENST00000261037 FSTL3O95633 263 aa8.88□□□□□ -0.99
COL8A1-201ENST00000261037 Q8N6K4 173 aa8.88□□□□□ -0.99
COL8A1-201ENST00000261037 DSCAML1Q8TD84 2053 aa8.88□□□□□ -0.99
COL8A1-201ENST00000261037 SRCAPQ6ZRS2 3230 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 PTPRQQ9UMZ3 2332 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 TRBV30A0A0K0K1B3 111 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 CD164L2Q6UWJ8 174 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 PLCE1Q9P212 2302 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 SNURFQ9Y675 71 aa8.87□□□□□ -0.99
COL8A1-201ENST00000261037 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
COL8A1-201ENST00000261037 PCNX3Q9H6A9 2034 aa8.86□□□□□ -0.99
COL8A1-201ENST00000261037 RETNQ9HD89 108 aa8.86□□□□□ -0.99
COL8A1-201ENST00000261037 Q6ZQY7 126 aa8.86□□□□□ -0.99
COL8A1-201ENST00000261037 CREBBPQ92793 2442 aa8.86□□□□□ -0.99
COL8A1-201ENST00000261037 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 CUL9Q8IWT3 2517 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 M0R378 163 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 LELP1Q5T871 98 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
COL8A1-201ENST00000261037 ANKHD1Q8IWZ3 2542 aaKnown RBP8.84□□□□□ -0.99
COL8A1-201ENST00000261037 IGLV1-40P01703 118 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 PRR4Q16378 134 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 MED12LQ86YW9 2145 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 AVPP01185 164 aa8.84□□□□□ -0.99
COL8A1-201ENST00000261037 TANC2Q9HCD6 1990 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 KLLNB2CW77 178 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 FAM30AQ9NZY2 134 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 NDUFA7O95182 113 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 ACACBO00763 2458 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 UBE2D3P61077 147 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 YPEL4Q96NS1 127 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 LRP4O75096 1905 aa8.83□□□□□ -1
COL8A1-201ENST00000261037 UQCRQO14949 82 aa8.82□□□□□ -1
COL8A1-201ENST00000261037 A0A0U1RQV1 116 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms