RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 LINC01356Q8N9X3 169 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV4-30-2A0A087WSY4 118 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 A0A087WW49 117 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 A0A087WYN8 130 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 LINC01600Q96MT4 127 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 COL4A2P08572 1712 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 C9orf47Q6ZRZ4 202 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 URB1O60287 2271 aaKnown RBP4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 LHBP01229 141 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 CDKN2A-AS1Q9UH64 79 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 CEP290O15078 2479 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 COX7BP24311 80 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 IGIPA6NJ69 53 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 H0Y9J4 135 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 DEFB105AQ8NG35 78 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 IBA57-AS1B1ANH7 110 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 C19orf84I3L1E1 186 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 FREM1Q5H8C1 2179 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 RTTNQ86VV8 2226 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 AVPP01185 164 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 DNAJC9-AS1A6NH13 148 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 C3orf84H3BNL1 204 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 ARFGEF3Q5TH69 2177 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 COL5A1P20908 1838 aaPredicted RBP4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 GAS8-AS1O95177 125 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 NCOA6Q14686 2063 aaPredicted RBP4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV1D-37A0A075B6S9 117 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 FBXL19-AS1Q494R0 122 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 Q8N814 137 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 ADAMTS9Q9P2N4 1935 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGLV2-18A0A075B6J9 118 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 MSMBP08118 114 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 WFDC10BQ8IUB3 73 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 Q8NA96 180 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 FSHBP01225 129 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV1-17P01599 117 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV4-59P01825 116 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 LINC00467Q9BRT7 94 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 J3QKU1 62 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 USMG5Q96IX5 58 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 DAZAP2Q15038 168 aaPredicted RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 Q6ZQY7 126 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 TRGV1A0A0A0MS02 117 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 ATP6V0E1O15342 81 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 UNQ9165/PRO28630Q6UXU0 137 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 Q6ZPA2 131 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 H3BUX3 64 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV3-11P01762 117 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 BRD3OSQ6XYD6 125 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 CTSZQ9UBR2 303 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 DNAJC13O75165 2243 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 EML6Q6ZMW3 1958 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 I3L2K1 104 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 DOCK10Q96BY6 2186 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PRAC2D3DTV9 90 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PSCAO43653 123 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ASXL3Q9C0F0 2248 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ZNRD1Q9P1U0 126 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PRR14LQ5THK1 2151 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 NCOR1O75376 2440 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 LINC00313P59037 77 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV3-16A0A0C4DH30 117 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 BRWD1-AS2P59051 145 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 CEP192Q8TEP8 1941 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ATG2AQ2TAZ0 1938 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 DOPEY2Q9Y3R5 2298 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 H0Y9P7 68 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 H3BPC8 53 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 OVOL3O00110 214 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 ZDBF2Q9HCK1 2354 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 TECTAO75443 2155 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 CMC4P56277 68 aaPredicted RBP4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 RNF223E7ERA6 249 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 KIF25-AS1Q9Y6Z4 181 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 A0A0J9YWU9 116 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV3-53P01767 116 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 RHPN1-AS1Q9BWJ2 59 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 WISP2O76076 250 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 CADP27708 2225 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 ZNF843Q8N446 348 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 CRIP3Q6Q6R5 217 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms