RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 RPL35AP18077 110 aaKnown RBP6.8□□□□□ -1.32
RPA1-201ENST00000254719 HELZ2Q9BYK8 2649 aaKnown RBP6.8□□□□□ -1.32
RPA1-201ENST00000254719 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 H3BMM0 161 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 TSHBP01222 138 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 GAGE4Q13068 117 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 GAGE5Q13069 117 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
RPA1-201ENST00000254719 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 UBE2WQ96B02 151 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
RPA1-201ENST00000254719 IGHV3-16A0A0C4DH30 117 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 PSMB8P28062 276 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 ATP6V0E2Q8NHE4 81 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 PAX4O43316 350 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 Q9UF83 564 aa6.79□□□□□ -1.32
RPA1-201ENST00000254719 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 FN1P02751 2386 aaKnown RBP6.78□□□□□ -1.32
RPA1-201ENST00000254719 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
RPA1-201ENST00000254719 Q6YL49 198 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 CRYGDP07320 174 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 APOC4P55056 127 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 KLLNB2CW77 178 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 SLURP1P55000 103 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 C18orf65Q6ZTR6 163 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 MAPK1IP1LQ8NDC0 245 aa6.78□□□□□ -1.32
RPA1-201ENST00000254719 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 J3QKU1 62 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 NXPH4O95158 308 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 SLC25A29Q8N8R3 303 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
RPA1-201ENST00000254719 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 K7EQD1 137 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 GAGE7O76087 117 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 TRBV7-3A0A075B6L6 115 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 ACYP1P07311 99 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 JPT2Q9H910 190 aa6.76□□□□□ -1.33
RPA1-201ENST00000254719 TRAV8-3A0A0A6YYJ7 113 aa6.75□□□□□ -1.33
RPA1-201ENST00000254719 NPC2P61916 151 aa6.75□□□□□ -1.33
RPA1-201ENST00000254719 A4D1N5 150 aa6.75□□□□□ -1.33
RPA1-201ENST00000254719 CRLF1O75462 422 aa6.75□□□□□ -1.33
RPA1-201ENST00000254719 PRM2P04554 102 aa6.75□□□□□ -1.33
RPA1-201ENST00000254719 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
RPA1-201ENST00000254719 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 TMEM61Q8N0U2 210 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
RPA1-201ENST00000254719 FOXI1Q12951 378 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
RPA1-201ENST00000254719 CARD19Q96LW7 228 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 DEFB130BP0DP73 79 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 DEFB130AP0DP74 79 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 HTN3P15516 51 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 H3BT86 120 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
RPA1-201ENST00000254719 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
RPA1-201ENST00000254719 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 DAD1P61803 113 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 Q6ZUT4 128 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 C9orf85Q96MD7 179 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 MAP6D1Q9H9H5 199 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.73□□□□□ -1.33
RPA1-201ENST00000254719 IGKV2-29A2NJV5 120 aaPredicted RBP6.73□□□□□ -1.33
RPA1-201ENST00000254719 H7C423 109 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 M0QY20 66 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 Q9H8V8 135 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 H0YGX0 51 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 IGHV4-31P0DP07 118 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 DEFB136Q30KP8 78 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 AMELXQ99217 191 aa6.73□□□□□ -1.33
RPA1-201ENST00000254719 NDUFA11Q86Y39 141 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
RPA1-201ENST00000254719 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 C9orf66Q5T8R8 295 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 GAGE6Q13070 117 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 Q6ZSV7 163 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
RPA1-201ENST00000254719 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms