RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
LRFN1-201ENST00000248668 OTOGQ6ZRI0 2925 aa11.44□□□□□ -0.58
LRFN1-201ENST00000248668 C11orf72Q8NBR9 251 aa11.44□□□□□ -0.58
LRFN1-201ENST00000248668 NBEAL2Q6ZNJ1 2754 aa11.44□□□□□ -0.58
LRFN1-201ENST00000248668 TRAV4A0A0B4J268 109 aa11.44□□□□□ -0.58
LRFN1-201ENST00000248668 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
LRFN1-201ENST00000248668 A8MTW9 85 aa11.43□□□□□ -0.58
LRFN1-201ENST00000248668 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
LRFN1-201ENST00000248668 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
LRFN1-201ENST00000248668 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
LRFN1-201ENST00000248668 NDUFV3P56181 108 aaKnown RBP11.43□□□□□ -0.58
LRFN1-201ENST00000248668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
LRFN1-201ENST00000248668 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
LRFN1-201ENST00000248668 A8MWV9 139 aa11.42□□□□□ -0.58
LRFN1-201ENST00000248668 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
LRFN1-201ENST00000248668 RHOHQ15669 191 aa11.42□□□□□ -0.58
LRFN1-201ENST00000248668 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
LRFN1-201ENST00000248668 VWFP04275 2813 aa11.42□□□□□ -0.58
LRFN1-201ENST00000248668 TRBV7-3A0A075B6L6 115 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 HERVK_113P61574 105 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 PPDPFLQ8WWR9 84 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 VCX2Q9H322 139 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 CRLF1O75462 422 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 IFITM1P13164 125 aa11.41□□□□□ -0.58
LRFN1-201ENST00000248668 RNASE1P07998 156 aaKnown RBP11.4□□□□□ -0.58
LRFN1-201ENST00000248668 Q6ZTI0 123 aa11.39□□□□□ -0.59
LRFN1-201ENST00000248668 ANKRD29Q8N6D5 301 aa11.38□□□□□ -0.59
LRFN1-201ENST00000248668 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
LRFN1-201ENST00000248668 PAPPA-AS1Q5QFB9 102 aa11.38□□□□□ -0.59
LRFN1-201ENST00000248668 SPXQ9BT56 116 aa11.38□□□□□ -0.59
LRFN1-201ENST00000248668 TEN1Q86WV5 123 aa11.37□□□□□ -0.59
LRFN1-201ENST00000248668 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
LRFN1-201ENST00000248668 J3QQQ9 107 aa11.37□□□□□ -0.59
LRFN1-201ENST00000248668 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
LRFN1-201ENST00000248668 TCL1BO95988 128 aa11.36□□□□□ -0.59
LRFN1-201ENST00000248668 LGALS3P17931 250 aaKnown RBP11.36□□□□□ -0.59
LRFN1-201ENST00000248668 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
LRFN1-201ENST00000248668 TAL2Q16559 108 aa11.36□□□□□ -0.59
LRFN1-201ENST00000248668 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
LRFN1-201ENST00000248668 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
LRFN1-201ENST00000248668 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
LRFN1-201ENST00000248668 FAM104AQ969W3 186 aa11.35□□□□□ -0.59
LRFN1-201ENST00000248668 C9JAW5 83 aa11.35□□□□□ -0.59
LRFN1-201ENST00000248668 TRAV8-3A0A0A6YYJ7 113 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 A0A0J9YY99 117 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 A8MZ25 164 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 RHODO00212 210 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 HILS1P60008 231 aa11.34□□□□□ -0.59
LRFN1-201ENST00000248668 MAST4O15021 2626 aa11.33□□□□□ -0.6
LRFN1-201ENST00000248668 TMEM223A0PJW6 202 aa11.33□□□□□ -0.6
LRFN1-201ENST00000248668 RS1O15537 224 aa11.33□□□□□ -0.6
LRFN1-201ENST00000248668 GIG44P09565 113 aaPredicted RBP11.33□□□□□ -0.6
LRFN1-201ENST00000248668 BEAN1Q3B7T3 259 aa11.33□□□□□ -0.6
LRFN1-201ENST00000248668 C16orf95Q9H693 158 aa11.33□□□□□ -0.6
LRFN1-201ENST00000248668 NSD1Q96L73 2696 aaPredicted RBP11.32□□□□□ -0.6
LRFN1-201ENST00000248668 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
LRFN1-201ENST00000248668 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 LY6G6DO95868 133 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 Q1RN00 199 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 AMELXQ99217 191 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 F8P00451 2351 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
LRFN1-201ENST00000248668 NTN5Q8WTR8 489 aaPredicted RBP11.31□□□□□ -0.6
LRFN1-201ENST00000248668 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 HIVEP1P15822 2718 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 DGAT2L7PQ6IED9 249 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 NDUFA7O95182 113 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 PF4P02776 101 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 EDA2RQ9HAV5 297 aa11.3□□□□□ -0.6
LRFN1-201ENST00000248668 TRGV2A0A075B6R0 118 aa11.29□□□□□ -0.6
LRFN1-201ENST00000248668 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
LRFN1-201ENST00000248668 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
LRFN1-201ENST00000248668 MGAM2Q2M2H8 2515 aa11.29□□□□□ -0.6
LRFN1-201ENST00000248668 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 LEPROTO15243 131 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 PYGO1Q9Y3Y4 419 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 A4D1N5 150 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 UBE2D3P61077 147 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 UBE2D2P62837 147 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 PIK3CD-AS1Q5SR53 167 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
LRFN1-201ENST00000248668 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
LRFN1-201ENST00000248668 C10orf126Q8N4M7 172 aa11.27□□□□□ -0.6
LRFN1-201ENST00000248668 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
LRFN1-201ENST00000248668 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
LRFN1-201ENST00000248668 NPC2P61916 151 aa11.27□□□□□ -0.61
LRFN1-201ENST00000248668 SLC25A20O43772 301 aa11.27□□□□□ -0.61
LRFN1-201ENST00000248668 UBE2D1P51668 147 aa11.27□□□□□ -0.61
LRFN1-201ENST00000248668 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms