RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
SDF2-201ENST00000247020 C11orf86A6NJI1 115 aa9.9□□□□□ -0.82
SDF2-201ENST00000247020 LINC00587B1AMM8 73 aa9.9□□□□□ -0.82
SDF2-201ENST00000247020 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
SDF2-201ENST00000247020 STPG4Q8N801 248 aa9.9□□□□□ -0.82
SDF2-201ENST00000247020 C14orf144Q96I85 54 aa9.9□□□□□ -0.82
SDF2-201ENST00000247020 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
SDF2-201ENST00000247020 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
SDF2-201ENST00000247020 DLEU1O43261 78 aa9.89□□□□□ -0.83
SDF2-201ENST00000247020 Q6ZUT4 128 aa9.89□□□□□ -0.83
SDF2-201ENST00000247020 TMEM101Q96IK0 257 aa9.89□□□□□ -0.83
SDF2-201ENST00000247020 HERVK_113P61574 105 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 AMMECR1LQ6DCA0 310 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 CEMP1Q6PRD7 247 aaPredicted RBP9.88□□□□□ -0.83
SDF2-201ENST00000247020 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 A0A0J9YY99 117 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 DEFA6Q01524 100 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
SDF2-201ENST00000247020 TINCRA0A1B0GVN0 87 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 E9PLD3 99 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 HTN3P15516 51 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 HNRNPA3P51991 378 aaKnown RBP9.87□□□□□ -0.83
SDF2-201ENST00000247020 SEC11AP67812 179 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
SDF2-201ENST00000247020 MRPS16Q9Y3D3 137 aaKnown RBP9.87□□□□□ -0.83
SDF2-201ENST00000247020 NBEAL1Q6ZS30 2694 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 A0A1B0GUV1 79 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 UBE2D1P51668 147 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 TIRAPP58753 221 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 Q6ZTC4 211 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 CHCHD5Q9BSY4 110 aa9.86□□□□□ -0.83
SDF2-201ENST00000247020 SIVA1O15304 175 aa9.85□□□□□ -0.83
SDF2-201ENST00000247020 NMUP48645 174 aa9.85□□□□□ -0.83
SDF2-201ENST00000247020 A0A096LPF7 62 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 A0A0J9YXV3 536 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 IGKV2D-26A0A0A0MRZ7 120 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
SDF2-201ENST00000247020 GAGE6Q13070 117 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
SDF2-201ENST00000247020 MGAM2Q2M2H8 2515 aa9.83□□□□□ -0.84
SDF2-201ENST00000247020 HERVK_113P63121 156 aa9.83□□□□□ -0.84
SDF2-201ENST00000247020 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
SDF2-201ENST00000247020 LELP1Q5T871 98 aa9.83□□□□□ -0.84
SDF2-201ENST00000247020 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
SDF2-201ENST00000247020 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
SDF2-201ENST00000247020 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
SDF2-201ENST00000247020 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
SDF2-201ENST00000247020 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
SDF2-201ENST00000247020 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
SDF2-201ENST00000247020 GEMIN7Q9H840 131 aaKnown RBP9.81□□□□□ -0.84
SDF2-201ENST00000247020 CTAG1AP78358 180 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 H3BRM9 83 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 M0R143 59 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 LEPROTO15243 131 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 CCL25O15444 150 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 LBHQ53QV2 105 aaPredicted RBP9.8□□□□□ -0.84
SDF2-201ENST00000247020 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 C2orf91Q6ZV80 131 aa9.8□□□□□ -0.84
SDF2-201ENST00000247020 IGLV4-60A0A075B6I1 120 aa9.79□□□□□ -0.84
SDF2-201ENST00000247020 TRAV8-6A0A0B4J262 113 aa9.79□□□□□ -0.84
SDF2-201ENST00000247020 TCTAP57738 103 aa9.79□□□□□ -0.84
SDF2-201ENST00000247020 RBX1P62877 108 aa9.79□□□□□ -0.84
SDF2-201ENST00000247020 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
SDF2-201ENST00000247020 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
SDF2-201ENST00000247020 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
SDF2-201ENST00000247020 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
SDF2-201ENST00000247020 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
SDF2-201ENST00000247020 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
SDF2-201ENST00000247020 J3QQQ9 107 aa9.76□□□□□ -0.85
SDF2-201ENST00000247020 TP73-AS1Q9UF72 201 aa9.76□□□□□ -0.85
SDF2-201ENST00000247020 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
SDF2-201ENST00000247020 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
SDF2-201ENST00000247020 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
SDF2-201ENST00000247020 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
SDF2-201ENST00000247020 MAPKAPK5-AS1Q8N8E1 139 aa9.75□□□□□ -0.85
SDF2-201ENST00000247020 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
SDF2-201ENST00000247020 HUWE1Q7Z6Z7 4374 aaKnown RBP9.74□□□□□ -0.85
SDF2-201ENST00000247020 COX6A2Q02221 97 aa9.74□□□□□ -0.85
SDF2-201ENST00000247020 HSD52Q0P140 79 aa9.74□□□□□ -0.85
SDF2-201ENST00000247020 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
SDF2-201ENST00000247020 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
SDF2-201ENST00000247020 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
SDF2-201ENST00000247020 SS18Q15532 418 aa9.73□□□□□ -0.85
SDF2-201ENST00000247020 TAL2Q16559 108 aa9.73□□□□□ -0.85
SDF2-201ENST00000247020 EREGO14944 169 aa9.72□□□□□ -0.85
SDF2-201ENST00000247020 TSPEAR-AS2P59090 65 aa9.72□□□□□ -0.85
SDF2-201ENST00000247020 SPINK8P0C7L1 97 aa9.71□□□□□ -0.85
SDF2-201ENST00000247020 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms