RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 CRIP1P50238 77 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 PLA2G2CQ5R387 149 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 ODF3BA8MYP8 253 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 K7ERS5 55 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 NCOR2Q9Y618 2525 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 Q8N7P7 452 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 LINC00467Q9BRT7 94 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 CCL18P55774 89 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 H0Y9J4 135 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 UBE2D3P61077 147 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 UBE2D2P62837 147 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 INSL3P51460 131 aa6.18□□□□□ -1.42
APOB-201ENST00000233242 IGKV4-1P06312 121 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 UBE2D1P51668 147 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 CEMP1Q6PRD7 247 aaPredicted RBP6.17□□□□□ -1.42
APOB-201ENST00000233242 UNQ9165/PRO28630Q6UXU0 137 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 DEFB136Q30KP8 78 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 Q96MF0 132 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 MIFP14174 115 aa6.17□□□□□ -1.42
APOB-201ENST00000233242 PIP4P1Q86T03 277 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 SIRPDQ9H106 197 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 B9D2Q9BPU9 175 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 COX17Q14061 63 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 CCKP06307 115 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 IGHV4-38-2P0DP08 117 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 COL4A6Q14031 1691 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 WFDC11Q8NEX6 87 aa6.16□□□□□ -1.42
APOB-201ENST00000233242 A6NED7 52 aa6.15□□□□□ -1.42
APOB-201ENST00000233242 IGF1P05019 195 aa6.15□□□□□ -1.42
APOB-201ENST00000233242 KIR2DL5BQ8NHK3 375 aa6.15□□□□□ -1.42
APOB-201ENST00000233242 EBI3Q14213 229 aa6.15□□□□□ -1.42
APOB-201ENST00000233242 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
APOB-201ENST00000233242 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
APOB-201ENST00000233242 DHRS4-AS1Q9P1J3 65 aa6.15□□□□□ -1.43
APOB-201ENST00000233242 KLK12Q9UKR0 248 aa6.15□□□□□ -1.43
APOB-201ENST00000233242 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.43
APOB-201ENST00000233242 K7EQG2 157 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 CHCHD10Q8WYQ3 142 aaPredicted RBP6.14□□□□□ -1.43
APOB-201ENST00000233242 TSHBP01222 138 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 REG3AQ06141 175 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 FBXL19-AS1Q494R0 122 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.14□□□□□ -1.43
APOB-201ENST00000233242 NUP210LQ5VU65 1888 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
APOB-201ENST00000233242 DAZAP2Q15038 168 aaPredicted RBP6.13□□□□□ -1.43
APOB-201ENST00000233242 IGHV4-61A0A0C4DH41 118 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
APOB-201ENST00000233242 CSDC2Q9Y534 153 aaKnown RBP6.13□□□□□ -1.43
APOB-201ENST00000233242 A6NDX4 124 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 SLPIP03973 132 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 DEFB1P60022 68 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 C6orf99Q4VX62 202 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 MRGPRG-AS1Q2M3A8 158 aa6.13□□□□□ -1.43
APOB-201ENST00000233242 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 KLLNB2CW77 178 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
APOB-201ENST00000233242 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 EXPH5Q8NEV8 1989 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
APOB-201ENST00000233242 NRGNQ92686 78 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 TRBV7-7A0A0K0K1E9 115 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 MAPK1IP1LQ8NDC0 245 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 CASC2Q6XLA1 102 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 PRORYQ9H606 182 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 LY6LH3BQJ8 138 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 C9orf85Q96MD7 179 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 MTORP42345 2549 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 ANKRD11Q6UB99 2663 aaPredicted RBP6.11□□□□□ -1.43
APOB-201ENST00000233242 Q6ZTI0 123 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 COX8CQ7Z4L0 72 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 MSMPQ1L6U9 139 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 SCXQ7RTU7 201 aa6.11□□□□□ -1.43
APOB-201ENST00000233242 RNASE3P12724 160 aaKnown RBP6.1□□□□□ -1.43
APOB-201ENST00000233242 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
APOB-201ENST00000233242 Q6ZS46 218 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 SMAD5-AS1Q9Y6J3 95 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 Q6ZQY7 126 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
APOB-201ENST00000233242 NTM-AS1Q6ZSK4 140 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 Q8N9L7 120 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 SMIM11BQ8TCY0 68 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 CEP295Q9C0D2 2601 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 M0R378 163 aa6.1□□□□□ -1.43
APOB-201ENST00000233242 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
APOB-201ENST00000233242 C1orf229Q6ZS94 237 aaPredicted RBP6.09□□□□□ -1.43
APOB-201ENST00000233242 UBE2D4Q9Y2X8 147 aa6.09□□□□□ -1.43
APOB-201ENST00000233242 IGHV4-30-2A0A087WSY4 118 aa6.09□□□□□ -1.43
APOB-201ENST00000233242 GRNP28799 593 aaKnown RBP6.09□□□□□ -1.43
APOB-201ENST00000233242 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms