RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NCR3O14931 201 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 Q9H8V8 135 aa9.43□□□□□ -0.9
MSH2-201ENST00000233146 SS18Q15532 418 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 CCDC140Q96MF4 163 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 SIRPDQ9H106 197 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 PF4P02776 101 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 SEM1Q6ZVN7 128 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 TMEM105Q8N8V8 129 aa9.42□□□□□ -0.9
MSH2-201ENST00000233146 F8WEM9 126 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
MSH2-201ENST00000233146 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 DPM3Q9P2X0 92 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 PCNX1Q96RV3 2341 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 TACC2O95359 2948 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 ZNF292O60281 2723 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 IGLV5-45A0A087WSX0 123 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 KLK9Q2XQG4 91 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 KLK9Q9UKQ9 250 aa9.41□□□□□ -0.9
MSH2-201ENST00000233146 AKAP13Q12802 2813 aa9.4□□□□□ -0.9
MSH2-201ENST00000233146 CFHR3Q02985 330 aa9.4□□□□□ -0.9
MSH2-201ENST00000233146 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
MSH2-201ENST00000233146 F6UB75 175 aa9.4□□□□□ -0.9
MSH2-201ENST00000233146 RMI2Q96E14 147 aa9.4□□□□□ -0.9
MSH2-201ENST00000233146 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 KLLNB2CW77 178 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 IGHV7-81A0A0B4J1V7 117 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 CCL21O00585 134 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
MSH2-201ENST00000233146 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
MSH2-201ENST00000233146 ATP5EP56381 51 aaPredicted RBP9.38□□□□□ -0.91
MSH2-201ENST00000233146 PMAIP1Q13794 54 aa9.38□□□□□ -0.91
MSH2-201ENST00000233146 ROS1P08922 2347 aa9.38□□□□□ -0.91
MSH2-201ENST00000233146 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
MSH2-201ENST00000233146 H0YGX0 51 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 Q8N6K4 173 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 PTPRQQ9UMZ3 2332 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 BLCAPP62952 87 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
MSH2-201ENST00000233146 RELNP78509 3460 aa9.36□□□□□ -0.91
MSH2-201ENST00000233146 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
MSH2-201ENST00000233146 NDUFC1O43677 76 aa9.36□□□□□ -0.91
MSH2-201ENST00000233146 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
MSH2-201ENST00000233146 CRPP02741 224 aa9.36□□□□□ -0.91
MSH2-201ENST00000233146 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
MSH2-201ENST00000233146 LECT2O14960 151 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 COX6A2Q02221 97 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
MSH2-201ENST00000233146 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 PRR15Q8IV56 129 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 AKAP6Q13023 2319 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 IGFL2Q6UWQ7 119 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
MSH2-201ENST00000233146 IBA57-AS1B1ANH7 110 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
MSH2-201ENST00000233146 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 SLPIP03973 132 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
MSH2-201ENST00000233146 Q6ZRU5 148 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
MSH2-201ENST00000233146 TRAV10A0A0B4J240 114 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 UBL5Q9BZL1 73 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.31□□□□□ -0.92
MSH2-201ENST00000233146 Q8N9W7 124 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
MSH2-201ENST00000233146 JMJD7-PLA2G4BH0Y9G9 81 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 ACACBO00763 2458 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 PLAC8L1A1L4L8 177 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 ATP6V0E1O15342 81 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 LINC00467Q9BRT7 94 aa9.3□□□□□ -0.92
MSH2-201ENST00000233146 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
MSH2-201ENST00000233146 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
MSH2-201ENST00000233146 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
MSH2-201ENST00000233146 SPTBN1Q01082 2364 aaKnown RBP9.29□□□□□ -0.92
MSH2-201ENST00000233146 CACNA1AO00555 2505 aa9.29□□□□□ -0.92
MSH2-201ENST00000233146 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
MSH2-201ENST00000233146 TLN1Q9Y490 2541 aaKnown RBP9.29□□□□□ -0.92
MSH2-201ENST00000233146 MED13LQ71F56 2210 aa9.29□□□□□ -0.92
MSH2-201ENST00000233146 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
MSH2-201ENST00000233146 SND1-IT1Q9HBX3 110 aa9.28□□□□□ -0.92
MSH2-201ENST00000233146 G3V318 75 aa9.28□□□□□ -0.92
MSH2-201ENST00000233146 BSPH1Q075Z2 132 aa9.28□□□□□ -0.92
MSH2-201ENST00000233146 FAM215AQ9Y5M1 114 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms