RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TRBV25-1A0A075B6N4 114 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 A0A1B0GV90 55 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 MIFP14174 115 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
CDCA3-201ENST00000229265 AGRNO00468 2067 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 H3BRM9 83 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 LEPROTO15243 131 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 ZNF25P17030 456 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-201ENST00000229265 FHL2Q14192 279 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
CDCA3-201ENST00000229265 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 GAGE7O76087 117 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 BATFQ16520 125 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 LCE2DQ5TA82 110 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-201ENST00000229265 X6R8D5 127 aa7.55□□□□□ -1.2
CDCA3-201ENST00000229265 TRAV8-6A0A0B4J262 113 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 TMEM223A0PJW6 202 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 RNF183Q96D59 192 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 RETNQ9HD89 108 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
CDCA3-201ENST00000229265 CCL25O15444 150 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 CEND1Q8N111 149 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 FAM104AQ969W3 186 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 SPANXB1Q9NS25 103 aaPredicted RBP7.53□□□□□ -1.2
CDCA3-201ENST00000229265 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
CDCA3-201ENST00000229265 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 J3QQQ9 107 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 HERVK_113P63121 156 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 Q6ZVH6 145 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 TMEM243Q9BU79 118 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
CDCA3-201ENST00000229265 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 A6NJY4 79 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 TAX1BP3O14907 124 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 LINC00694P0DN24 101 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
CDCA3-201ENST00000229265 UBE2D1P51668 147 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 Q9UF83 564 aa7.51□□□□□ -1.21
CDCA3-201ENST00000229265 TRBV6-8A0A0A6YYG3 113 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 IGHV1-58A0A0C4DH39 117 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 UBE2L6O14933 153 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 IGHV4-30-4P0DP06 118 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
CDCA3-201ENST00000229265 GAGE4Q13068 117 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 GAGE5Q13069 117 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 NTM-AS1Q6ZSK4 140 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 PHLDA1Q8WV24 401 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-201ENST00000229265 HIST1H4GQ99525 98 aa7.5□□□□□ -1.21
CDCA3-201ENST00000229265 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 C9orf118A6NHY6 69 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 UBE2V1Q13404 147 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 OR5A1Q8NGJ0 315 aa7.49□□□□□ -1.21
CDCA3-201ENST00000229265 OPRPNQ99935 248 aaPredicted RBP7.49□□□□□ -1.21
CDCA3-201ENST00000229265 GEMIN7Q9H840 131 aaKnown RBP7.49□□□□□ -1.21
CDCA3-201ENST00000229265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-201ENST00000229265 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 A0A0J9YY99 117 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-201ENST00000229265 ATP5G1P05496 136 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 ATP6V0E2Q8NHE4 81 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 PPDPFQ9H3Y8 114 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 BIRC6Q9NR09 4857 aa7.48□□□□□ -1.21
CDCA3-201ENST00000229265 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 H3BNG1 76 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 TIMM17BO60830 172 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 GCSHP23434 173 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 SRSF9Q13242 221 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDCA3-201ENST00000229265 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 WWC2-AS2Q96NR7 200 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
CDCA3-201ENST00000229265 PAX4O43316 350 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms