RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 RAB5BP61020 215 aa9.18□□□□□ -0.94
UPK1A-201ENST00000222275 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
UPK1A-201ENST00000222275 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
UPK1A-201ENST00000222275 C20orf203Q8NBC4 194 aa9.18□□□□□ -0.94
UPK1A-201ENST00000222275 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
UPK1A-201ENST00000222275 TM2D2Q9BX73 214 aa9.18□□□□□ -0.94
UPK1A-201ENST00000222275 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
UPK1A-201ENST00000222275 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
UPK1A-201ENST00000222275 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
UPK1A-201ENST00000222275 Q8N976 141 aa9.17□□□□□ -0.94
UPK1A-201ENST00000222275 OR5A1Q8NGJ0 315 aa9.17□□□□□ -0.94
UPK1A-201ENST00000222275 MIAQ16674 131 aa9.16□□□□□ -0.94
UPK1A-201ENST00000222275 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
UPK1A-201ENST00000222275 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
UPK1A-201ENST00000222275 TRAV8-4A0A0B4J246 113 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 SCO1O75880 301 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
UPK1A-201ENST00000222275 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
UPK1A-201ENST00000222275 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 TRGC2P03986 189 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.95
UPK1A-201ENST00000222275 REG3AQ06141 175 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 Q8N3U1 123 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 Q9HAA7 133 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 AP5S1Q9NUS5 200 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
UPK1A-201ENST00000222275 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 PSCAO43653 123 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 NPSP0C0P6 89 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 LINC00614P0C842 121 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 C1orf43Q9BWL3 253 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
UPK1A-201ENST00000222275 CCL25O15444 150 aa9.12□□□□□ -0.95
UPK1A-201ENST00000222275 PAPPA-AS1Q5QFB9 102 aa9.12□□□□□ -0.95
UPK1A-201ENST00000222275 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
UPK1A-201ENST00000222275 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
UPK1A-201ENST00000222275 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
UPK1A-201ENST00000222275 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
UPK1A-201ENST00000222275 C16orf90A8MZG2 172 aa9.11□□□□□ -0.95
UPK1A-201ENST00000222275 MRPS36P82909 103 aaKnown RBP9.11□□□□□ -0.95
UPK1A-201ENST00000222275 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
UPK1A-201ENST00000222275 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
UPK1A-201ENST00000222275 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
UPK1A-201ENST00000222275 EREGO14944 169 aa9.1□□□□□ -0.95
UPK1A-201ENST00000222275 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
UPK1A-201ENST00000222275 Q6ZN92 141 aa9.1□□□□□ -0.95
UPK1A-201ENST00000222275 BAGE3Q86Y29 109 aa9.1□□□□□ -0.95
UPK1A-201ENST00000222275 SS18Q15532 418 aa9.09□□□□□ -0.95
UPK1A-201ENST00000222275 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
UPK1A-201ENST00000222275 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
UPK1A-201ENST00000222275 C1orf196B1AJZ1 125 aa9.08□□□□□ -0.96
UPK1A-201ENST00000222275 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
UPK1A-201ENST00000222275 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
UPK1A-201ENST00000222275 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 HBDP02042 147 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 ERASQ7Z444 233 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 VCX2Q9H322 139 aa9.07□□□□□ -0.96
UPK1A-201ENST00000222275 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
UPK1A-201ENST00000222275 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
UPK1A-201ENST00000222275 HSBP1O75506 76 aa9.06□□□□□ -0.96
UPK1A-201ENST00000222275 TEX43Q6ZNM6 134 aa9.06□□□□□ -0.96
UPK1A-201ENST00000222275 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
UPK1A-201ENST00000222275 Q6ZUT4 128 aa9.05□□□□□ -0.96
UPK1A-201ENST00000222275 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
UPK1A-201ENST00000222275 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
UPK1A-201ENST00000222275 IFITM10A6NMD0 228 aa9.04□□□□□ -0.96
UPK1A-201ENST00000222275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
UPK1A-201ENST00000222275 ATP5LO75964 103 aa9.04□□□□□ -0.96
UPK1A-201ENST00000222275 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
UPK1A-201ENST00000222275 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
UPK1A-201ENST00000222275 A0A087WTM6 91 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 TRAV13-1A0A0B4J241 112 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 SEC11AP67812 179 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 CFAP161Q6P656 301 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 CD164L2Q6UWJ8 174 aa9.03□□□□□ -0.96
UPK1A-201ENST00000222275 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BKO60814 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BJP06899 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BOP23527 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BBP33778 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BDP58876 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BCP62807 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST2H2BEQ16778 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BHQ93079 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 AMELXQ99217 191 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BNQ99877 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HIST1H2BMQ99879 126 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
UPK1A-201ENST00000222275 HERC1Q15751 4861 aa9.02□□□□□ -0.97
UPK1A-201ENST00000222275 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
UPK1A-201ENST00000222275 XCL1P47992 114 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms