RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TRGC2P03986 189 aa15.77■□□□□ 0.12
HOMER3-201ENST00000221222 RMI2Q96E14 147 aa15.77■□□□□ 0.12
HOMER3-201ENST00000221222 CLPSL2Q6UWE3 100 aa15.76■□□□□ 0.11
HOMER3-201ENST00000221222 TM2D2Q9BX73 214 aa15.76■□□□□ 0.11
HOMER3-201ENST00000221222 CDC42SE2Q9NRR3 84 aa15.76■□□□□ 0.11
HOMER3-201ENST00000221222 COX11Q9Y6N1 276 aa15.76■□□□□ 0.11
HOMER3-201ENST00000221222 FAT2Q9NYQ8 4349 aa15.76■□□□□ 0.11
HOMER3-201ENST00000221222 PRSS29PA6NIE9 313 aa15.75■□□□□ 0.11
HOMER3-201ENST00000221222 DGAT2L7PQ6IED9 249 aa15.75■□□□□ 0.11
HOMER3-201ENST00000221222 SPANXA1Q9NS26 97 aa15.75■□□□□ 0.11
HOMER3-201ENST00000221222 G0S2P27469 103 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 TNP2Q05952 138 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 FA2HQ7L5A8 372 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 ZNF664Q8N3J9 261 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 C1orf43Q9BWL3 253 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 CYSLTR1Q9Y271 337 aa15.74■□□□□ 0.11
HOMER3-201ENST00000221222 IGKV2D-24A0A075B6R9 120 aa15.73■□□□□ 0.11
HOMER3-201ENST00000221222 TRAV8-4A0A0B4J246 113 aa15.73■□□□□ 0.11
HOMER3-201ENST00000221222 C2orf66Q6UXQ4 117 aa15.73■□□□□ 0.11
HOMER3-201ENST00000221222 PYGO1Q9Y3Y4 419 aa15.73■□□□□ 0.11
HOMER3-201ENST00000221222 A0A1B0GVY2 172 aa15.72■□□□□ 0.11
HOMER3-201ENST00000221222 PSCAO43653 123 aa15.72■□□□□ 0.11
HOMER3-201ENST00000221222 URB1-AS1Q96HZ7 61 aa15.72■□□□□ 0.11
HOMER3-201ENST00000221222 MRPS36P82909 103 aaKnown RBP15.71■□□□□ 0.11
HOMER3-201ENST00000221222 FAM104AQ969W3 186 aa15.71■□□□□ 0.11
HOMER3-201ENST00000221222 AP5S1Q9NUS5 200 aa15.71■□□□□ 0.11
HOMER3-201ENST00000221222 LINC00614P0C842 121 aa15.7■□□□□ 0.1
HOMER3-201ENST00000221222 RAB5BP61020 215 aa15.7■□□□□ 0.1
HOMER3-201ENST00000221222 Q6ZUT4 128 aa15.7■□□□□ 0.1
HOMER3-201ENST00000221222 KRTAP26-1Q6PEX3 210 aa15.69■□□□□ 0.1
HOMER3-201ENST00000221222 TOMM6Q96B49 74 aa15.69■□□□□ 0.1
HOMER3-201ENST00000221222 PKHD1P08F94 4074 aa15.69■□□□□ 0.1
HOMER3-201ENST00000221222 MAPKAPK5-AS1Q8N8E1 139 aa15.68■□□□□ 0.1
HOMER3-201ENST00000221222 IGLV10-54A0A075B6I4 117 aa15.67■□□□□ 0.1
HOMER3-201ENST00000221222 IGKV3OR2-268A0A0C4DH90 116 aa15.67■□□□□ 0.1
HOMER3-201ENST00000221222 LINC01549A6NIU2 74 aa15.67■□□□□ 0.1
HOMER3-201ENST00000221222 NPSP0C0P6 89 aa15.67■□□□□ 0.1
HOMER3-201ENST00000221222 LRCOL1A6NCL2 159 aa15.66■□□□□ 0.1
HOMER3-201ENST00000221222 LINC00959A0A1B0GUT2 108 aa15.65■□□□□ 0.1
HOMER3-201ENST00000221222 IGIPA6NJ69 53 aa15.65■□□□□ 0.1
HOMER3-201ENST00000221222 RNASE13Q5GAN3 156 aaKnown RBP15.65■□□□□ 0.1
HOMER3-201ENST00000221222 OPRPNQ99935 248 aaPredicted RBP15.65■□□□□ 0.1
HOMER3-201ENST00000221222 PKD1P98161 4303 aa15.64■□□□□ 0.09
HOMER3-201ENST00000221222 PCLOQ9Y6V0 5065 aa15.64■□□□□ 0.09
HOMER3-201ENST00000221222 IGLV4-3A0A075B6K6 122 aa15.64■□□□□ 0.09
HOMER3-201ENST00000221222 A0A087WTM6 91 aa15.64■□□□□ 0.09
HOMER3-201ENST00000221222 CHCHD1Q96BP2 118 aaKnown RBP15.63■□□□□ 0.09
HOMER3-201ENST00000221222 TMEM141Q96I45 108 aa15.63■□□□□ 0.09
HOMER3-201ENST00000221222 TIMM17AQ99595 171 aa15.63■□□□□ 0.09
HOMER3-201ENST00000221222 DYNC1H1Q14204 4646 aaKnown RBP15.63■□□□□ 0.09
HOMER3-201ENST00000221222 A0A096LNJ9 63 aa15.62■□□□□ 0.09
HOMER3-201ENST00000221222 CCL25O15444 150 aa15.62■□□□□ 0.09
HOMER3-201ENST00000221222 CHCHD10Q8WYQ3 142 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-201ENST00000221222 SS18Q15532 418 aa15.62■□□□□ 0.09
HOMER3-201ENST00000221222 ERASQ7Z444 233 aa15.62■□□□□ 0.09
HOMER3-201ENST00000221222 BAGE3Q86Y29 109 aa15.62■□□□□ 0.09
HOMER3-201ENST00000221222 DNAH11Q96DT5 4516 aa15.61■□□□□ 0.09
HOMER3-201ENST00000221222 EREGO14944 169 aa15.61■□□□□ 0.09
HOMER3-201ENST00000221222 BAALCQ8WXS3 180 aa15.61■□□□□ 0.09
HOMER3-201ENST00000221222 SCGB3A1Q96QR1 104 aa15.61■□□□□ 0.09
HOMER3-201ENST00000221222 C1orf196B1AJZ1 125 aa15.6■□□□□ 0.09
HOMER3-201ENST00000221222 HBDP02042 147 aa15.6■□□□□ 0.09
HOMER3-201ENST00000221222 TRAV13-1A0A0B4J241 112 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 GAGE12HA6NDE8 117 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 WFDC2Q14508 124 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 PAPPA-AS1Q5QFB9 102 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 Q6ZN92 141 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 TEX43Q6ZNM6 134 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 AMELXQ99217 191 aa15.59■□□□□ 0.09
HOMER3-201ENST00000221222 IFITM10A6NMD0 228 aa15.58■□□□□ 0.08
HOMER3-201ENST00000221222 LINC00173Q6ZV60 143 aa15.58■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BKO60814 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BJP06899 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BOP23527 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BBP33778 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 XCL1P47992 114 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BDP58876 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BCP62807 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 PMCHL1Q16048 86 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST2H2BEQ16778 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BHQ93079 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BNQ99877 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 HIST1H2BMQ99879 126 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 VCX2Q9H322 139 aa15.57■□□□□ 0.08
HOMER3-201ENST00000221222 LECT2O14960 151 aa15.56■□□□□ 0.08
HOMER3-201ENST00000221222 LINC00310P59036 64 aa15.56■□□□□ 0.08
HOMER3-201ENST00000221222 FOXI1Q12951 378 aa15.56■□□□□ 0.08
HOMER3-201ENST00000221222 CD164L2Q6UWJ8 174 aa15.56■□□□□ 0.08
HOMER3-201ENST00000221222 Q8N814 137 aa15.56■□□□□ 0.08
HOMER3-201ENST00000221222 PDZD11Q5EBL8 140 aa15.55■□□□□ 0.08
HOMER3-201ENST00000221222 C2orf88Q9BSF0 95 aa15.55■□□□□ 0.08
HOMER3-201ENST00000221222 HSBP1O75506 76 aa15.54■□□□□ 0.08
HOMER3-201ENST00000221222 SERF1AO75920 110 aa15.54■□□□□ 0.08
HOMER3-201ENST00000221222 USP17L23D6RBM5 183 aa15.53■□□□□ 0.08
HOMER3-201ENST00000221222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.52■□□□□ 0.08
HOMER3-201ENST00000221222 UBE2D1P51668 147 aa15.52■□□□□ 0.08
HOMER3-201ENST00000221222 ZC2HC1BQ5TFG8 222 aa15.52■□□□□ 0.08
HOMER3-201ENST00000221222 SPATA12Q7Z6I5 190 aa15.52■□□□□ 0.08
HOMER3-201ENST00000221222 KRTAP10-2P60368 255 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms