RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 HBDP02042 147 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 NFE4Q86UQ8 179 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 LINC00269Q8N2A0 174 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 RMI2Q96E14 147 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
TIMP1-201ENST00000218388 NPSP0C0P6 89 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 Q6ZN92 141 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
TIMP1-201ENST00000218388 SERF1AO75920 110 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 MRPS36P82909 103 aaKnown RBP8.88□□□□□ -0.99
TIMP1-201ENST00000218388 REG3AQ06141 175 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 MIAQ16674 131 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 SCGB3A1Q96QR1 104 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 TIMM17AQ99595 171 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
TIMP1-201ENST00000218388 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 CLPSL2Q6UWE3 100 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 Q6ZUT4 128 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 ERASQ7Z444 233 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 Q9HAA7 133 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 COX11Q9Y6N1 276 aa8.87□□□□□ -0.99
TIMP1-201ENST00000218388 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
TIMP1-201ENST00000218388 IGKV3OR2-268A0A0C4DH90 116 aa8.86□□□□□ -0.99
TIMP1-201ENST00000218388 PMCHL1Q16048 86 aa8.86□□□□□ -0.99
TIMP1-201ENST00000218388 ENHOQ6UWT2 76 aa8.86□□□□□ -0.99
TIMP1-201ENST00000218388 C1orf43Q9BWL3 253 aa8.86□□□□□ -0.99
TIMP1-201ENST00000218388 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 A0A096LNJ9 63 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 IGIPA6NJ69 53 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
TIMP1-201ENST00000218388 ATP5LO75964 103 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 NDUFA6P56556 154 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 TEX43Q6ZNM6 134 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 VCX2Q9H322 139 aa8.85□□□□□ -0.99
TIMP1-201ENST00000218388 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 CCL25O15444 150 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 LINC00310P59036 64 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 SS18Q15532 418 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
TIMP1-201ENST00000218388 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
TIMP1-201ENST00000218388 SACSQ9NZJ4 4579 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
TIMP1-201ENST00000218388 IFITM10A6NMD0 228 aa8.83□□□□□ -1
TIMP1-201ENST00000218388 PSCAO43653 123 aa8.83□□□□□ -1
TIMP1-201ENST00000218388 S100A6P06703 90 aa8.83□□□□□ -1
TIMP1-201ENST00000218388 PDZD11Q5EBL8 140 aa8.83□□□□□ -1
TIMP1-201ENST00000218388 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
TIMP1-201ENST00000218388 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
TIMP1-201ENST00000218388 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
TIMP1-201ENST00000218388 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 LEPROTL1O95214 131 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 AMELXQ99217 191 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 HSPB8Q9UJY1 196 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 HYDINQ4G0P3 5121 aa8.82□□□□□ -1
TIMP1-201ENST00000218388 IGLV10-54A0A075B6I4 117 aa8.81□□□□□ -1
TIMP1-201ENST00000218388 NUPR1O60356 82 aa8.81□□□□□ -1
TIMP1-201ENST00000218388 FAM104AQ969W3 186 aa8.81□□□□□ -1
TIMP1-201ENST00000218388 PMVKQ15126 192 aa8.8□□□□□ -1
TIMP1-201ENST00000218388 BAALCQ8WXS3 180 aa8.8□□□□□ -1
TIMP1-201ENST00000218388 CHCHD10Q8WYQ3 142 aaPredicted RBP8.8□□□□□ -1
TIMP1-201ENST00000218388 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
TIMP1-201ENST00000218388 RYR2Q92736 4967 aa8.79□□□□□ -1
TIMP1-201ENST00000218388 LCE2BO14633 110 aa8.79□□□□□ -1
TIMP1-201ENST00000218388 XCL1P47992 114 aa8.79□□□□□ -1
TIMP1-201ENST00000218388 SEC11AP67812 179 aa8.79□□□□□ -1
TIMP1-201ENST00000218388 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
TIMP1-201ENST00000218388 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
TIMP1-201ENST00000218388 PRSS1P07477 247 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 FABP4P15090 132 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 UBE2D1P51668 147 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 CD164L2Q6UWJ8 174 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 CST9LQ9H4G1 147 aa8.78□□□□□ -1
TIMP1-201ENST00000218388 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
TIMP1-201ENST00000218388 RTL8CO15255 209 aa8.77□□□□□ -1.01
TIMP1-201ENST00000218388 EREGO14944 169 aa8.76□□□□□ -1.01
TIMP1-201ENST00000218388 S100A2P29034 98 aa8.76□□□□□ -1.01
TIMP1-201ENST00000218388 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
TIMP1-201ENST00000218388 HERVK_113P63121 156 aa8.76□□□□□ -1.01
TIMP1-201ENST00000218388 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
TIMP1-201ENST00000218388 MAP1LC3CQ9BXW4 147 aa8.76□□□□□ -1.01
TIMP1-201ENST00000218388 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
TIMP1-201ENST00000218388 PRSS29PA6NIE9 313 aa8.75□□□□□ -1.01
TIMP1-201ENST00000218388 FOXI1Q12951 378 aa8.75□□□□□ -1.01
TIMP1-201ENST00000218388 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
TIMP1-201ENST00000218388 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
TIMP1-201ENST00000218388 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms