RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 IGF2RP11717 2491 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 RNF183Q96D59 192 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 IGKV4-1P06312 121 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 TIMM17BO60830 172 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 PIEZO2Q9H5I5 2752 aa10.07□□□□□ -0.8
SF3A1-201ENST00000215793 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 Q8N976 141 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 PCDH15Q96QU1 1955 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 TRIAP1O43715 76 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 UQCRQO14949 82 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 YPEL4Q96NS1 127 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
SF3A1-201ENST00000215793 A0A087WZ39 114 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 NDUFV3P56181 108 aaKnown RBP10.05□□□□□ -0.8
SF3A1-201ENST00000215793 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 RBX1P62877 108 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 C20orf197Q8N268 126 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
SF3A1-201ENST00000215793 RNASE3P12724 160 aaKnown RBP10.04□□□□□ -0.8
SF3A1-201ENST00000215793 ALPK3Q96L96 1907 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 KLLNB2CW77 178 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 LINC00482Q8N8I6 264 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 LTBP2Q14767 1821 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 PRO3102Q9H379 93 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 CD164L2Q6UWJ8 174 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
SF3A1-201ENST00000215793 NRACQ8N912 160 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 ZNF702PQ9H963 129 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 A0A096LNI7 61 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 MT-ATP8P03928 68 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 PROK1P58294 105 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 TSHBP01222 138 aa10.03□□□□□ -0.8
SF3A1-201ENST00000215793 SLPIP03973 132 aa10.02□□□□□ -0.8
SF3A1-201ENST00000215793 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-201ENST00000215793 TRAV10A0A0B4J240 114 aa10.02□□□□□ -0.81
SF3A1-201ENST00000215793 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
SF3A1-201ENST00000215793 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
SF3A1-201ENST00000215793 PCNX3Q9H6A9 2034 aa10.02□□□□□ -0.81
SF3A1-201ENST00000215793 TLN1Q9Y490 2541 aaKnown RBP10.02□□□□□ -0.81
SF3A1-201ENST00000215793 LINC01006Q8NI28 216 aa10.01□□□□□ -0.81
SF3A1-201ENST00000215793 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
SF3A1-201ENST00000215793 ZNF106Q9H2Y7 1883 aaKnown RBP10.01□□□□□ -0.81
SF3A1-201ENST00000215793 IGLV1-40P01703 118 aa10.01□□□□□ -0.81
SF3A1-201ENST00000215793 CCKP06307 115 aa10□□□□□ -0.81
SF3A1-201ENST00000215793 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
SF3A1-201ENST00000215793 ENHOQ6UWT2 76 aa10□□□□□ -0.81
SF3A1-201ENST00000215793 C9orf85Q96MD7 179 aa10□□□□□ -0.81
SF3A1-201ENST00000215793 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
SF3A1-201ENST00000215793 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-201ENST00000215793 LELP1Q5T871 98 aa9.99□□□□□ -0.81
SF3A1-201ENST00000215793 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
SF3A1-201ENST00000215793 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-201ENST00000215793 PRR9Q5T870 116 aa9.98□□□□□ -0.81
SF3A1-201ENST00000215793 ZNF843Q8N446 348 aa9.98□□□□□ -0.81
SF3A1-201ENST00000215793 CNFNQ9BYD5 112 aa9.98□□□□□ -0.81
SF3A1-201ENST00000215793 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
SF3A1-201ENST00000215793 FAM236DA0A1B0GTK5 79 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 FAM236CP0DP71 79 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 KIAA1549Q9HCM3 1950 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 M0R378 163 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 DCANP1Q8TF63 244 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 Q6ZQY7 126 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 DHRS4-AS1Q9P1J3 65 aa9.97□□□□□ -0.81
SF3A1-201ENST00000215793 LST1O00453 97 aa9.96□□□□□ -0.81
SF3A1-201ENST00000215793 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.81
SF3A1-201ENST00000215793 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.81
SF3A1-201ENST00000215793 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.96□□□□□ -0.81
SF3A1-201ENST00000215793 IMUPQ9GZP8 106 aa9.96□□□□□ -0.81
SF3A1-201ENST00000215793 A8MZ25 164 aa9.96□□□□□ -0.82
SF3A1-201ENST00000215793 BRK1Q8WUW1 75 aa9.96□□□□□ -0.82
SF3A1-201ENST00000215793 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 MRPS12O15235 138 aaKnown RBP9.95□□□□□ -0.82
SF3A1-201ENST00000215793 C2orf91Q6ZV80 131 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 LY6G6DO95868 133 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 C3orf22Q8N5N4 141 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 LRCOL1A6NCL2 159 aa9.95□□□□□ -0.82
SF3A1-201ENST00000215793 UBE2D1P51668 147 aa9.94□□□□□ -0.82
SF3A1-201ENST00000215793 COX17Q14061 63 aa9.94□□□□□ -0.82
SF3A1-201ENST00000215793 KIAA1549LQ6ZVL6 1849 aa9.94□□□□□ -0.82
SF3A1-201ENST00000215793 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
SF3A1-201ENST00000215793 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
SF3A1-201ENST00000215793 UBE2D3P61077 147 aa9.93□□□□□ -0.82
SF3A1-201ENST00000215793 UBE2D2P62837 147 aa9.93□□□□□ -0.82
SF3A1-201ENST00000215793 TANC2Q9HCD6 1990 aa9.92□□□□□ -0.82
SF3A1-201ENST00000215793 NDUFC1O43677 76 aa9.92□□□□□ -0.82
SF3A1-201ENST00000215793 ZNF706Q9Y5V0 76 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-201ENST00000215793 Q6ZS46 218 aa9.92□□□□□ -0.82
SF3A1-201ENST00000215793 Q8IZM0 81 aa9.92□□□□□ -0.82
SF3A1-201ENST00000215793 SVIPQ8NHG7 77 aa9.92□□□□□ -0.82
SF3A1-201ENST00000215793 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms