RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
PTPN18-201ENST00000175756 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
PTPN18-201ENST00000175756 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
PTPN18-201ENST00000175756 CUBNO60494 3623 aa12.59□□□□□ -0.39
PTPN18-201ENST00000175756 NDUFA7O95182 113 aa12.58□□□□□ -0.4
PTPN18-201ENST00000175756 CRLF1O75462 422 aa12.58□□□□□ -0.4
PTPN18-201ENST00000175756 ZANQ9Y493 2812 aa12.58□□□□□ -0.4
PTPN18-201ENST00000175756 RPL32P62910 135 aaKnown RBP12.58□□□□□ -0.4
PTPN18-201ENST00000175756 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
PTPN18-201ENST00000175756 PFN2P35080 140 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 VSIG2Q96IQ7 327 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 GAGE2AQ6NT46 116 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 Q6ZSN1 163 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 VPREB3Q9UKI3 123 aa12.57□□□□□ -0.4
PTPN18-201ENST00000175756 NXPH4O95158 308 aa12.56□□□□□ -0.4
PTPN18-201ENST00000175756 MIAQ16674 131 aa12.56□□□□□ -0.4
PTPN18-201ENST00000175756 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
PTPN18-201ENST00000175756 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
PTPN18-201ENST00000175756 SPANXA1Q9NS26 97 aa12.56□□□□□ -0.4
PTPN18-201ENST00000175756 UTP20O75691 2785 aaKnown RBP12.55□□□□□ -0.4
PTPN18-201ENST00000175756 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
PTPN18-201ENST00000175756 IGSF10Q6WRI0 2623 aa12.54□□□□□ -0.4
PTPN18-201ENST00000175756 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
PTPN18-201ENST00000175756 PAX4O43316 350 aa12.53□□□□□ -0.4
PTPN18-201ENST00000175756 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
PTPN18-201ENST00000175756 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
PTPN18-201ENST00000175756 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
PTPN18-201ENST00000175756 H7C423 109 aa12.52□□□□□ -0.41
PTPN18-201ENST00000175756 Q9HAA7 133 aa12.52□□□□□ -0.41
PTPN18-201ENST00000175756 CRPP02741 224 aa12.52□□□□□ -0.41
PTPN18-201ENST00000175756 SMIM20Q8N5G0 67 aa12.52□□□□□ -0.41
PTPN18-201ENST00000175756 COPS9Q8WXC6 57 aa12.52□□□□□ -0.41
PTPN18-201ENST00000175756 TRBV30A0A0K0K1B3 111 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 CCDC179H3BU77 68 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 HERVK_113P63121 156 aa12.51□□□□□ -0.41
PTPN18-201ENST00000175756 TINCRA0A1B0GVN0 87 aa12.5□□□□□ -0.41
PTPN18-201ENST00000175756 AMELXQ99217 191 aa12.5□□□□□ -0.41
PTPN18-201ENST00000175756 CHD6Q8TD26 2715 aa12.5□□□□□ -0.41
PTPN18-201ENST00000175756 MRPS36P82909 103 aaKnown RBP12.5□□□□□ -0.41
PTPN18-201ENST00000175756 UBE2D4Q9Y2X8 147 aa12.5□□□□□ -0.41
PTPN18-201ENST00000175756 Q6ZTI0 123 aa12.49□□□□□ -0.41
PTPN18-201ENST00000175756 ODF3Q96PU9 254 aa12.49□□□□□ -0.41
PTPN18-201ENST00000175756 MAP6D1Q9H9H5 199 aa12.49□□□□□ -0.41
PTPN18-201ENST00000175756 CLPSL2Q6UWE3 100 aa12.48□□□□□ -0.41
PTPN18-201ENST00000175756 C5orf38Q86SI9 138 aa12.48□□□□□ -0.41
PTPN18-201ENST00000175756 HELZ2Q9BYK8 2649 aaKnown RBP12.48□□□□□ -0.41
PTPN18-201ENST00000175756 A0A096LPF7 62 aa12.48□□□□□ -0.41
PTPN18-201ENST00000175756 COX6A2Q02221 97 aa12.48□□□□□ -0.41
PTPN18-201ENST00000175756 FAM236AA0A1B0GUQ0 79 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 FAM236BA0A1B0GV22 79 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 DSCR9P59020 149 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 LINC00308Q8TCZ7 52 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 H3BT86 120 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 PYGO1Q9Y3Y4 419 aa12.47□□□□□ -0.41
PTPN18-201ENST00000175756 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.42
PTPN18-201ENST00000175756 TMEM243Q9BU79 118 aa12.46□□□□□ -0.42
PTPN18-201ENST00000175756 C6orf226Q5I0X4 101 aa12.46□□□□□ -0.42
PTPN18-201ENST00000175756 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
PTPN18-201ENST00000175756 LINC00694P0DN24 101 aa12.45□□□□□ -0.42
PTPN18-201ENST00000175756 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
PTPN18-201ENST00000175756 RBMY1BA6NDE4 496 aaKnown RBP12.44□□□□□ -0.42
PTPN18-201ENST00000175756 RBMY1EA6NEQ0 496 aaKnown RBP12.44□□□□□ -0.42
PTPN18-201ENST00000175756 RBMY1DP0C7P1 496 aaKnown RBP12.44□□□□□ -0.42
PTPN18-201ENST00000175756 Q96MF0 132 aa12.44□□□□□ -0.42
PTPN18-201ENST00000175756 USP24Q9UPU5 2620 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 ATP5G1P05496 136 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 HIST2H2BCQ6DN03 193 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 LST1O00453 97 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 MIR7-3HGQ8N6C7 128 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 TEX15Q9BXT5 2789 aa12.43□□□□□ -0.42
PTPN18-201ENST00000175756 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
PTPN18-201ENST00000175756 DAZ4Q86SG3 579 aaKnown RBP12.42□□□□□ -0.42
PTPN18-201ENST00000175756 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
PTPN18-201ENST00000175756 DAZ3Q9NR90 486 aaKnown RBP12.42□□□□□ -0.42
PTPN18-201ENST00000175756 C9orf153Q5TBE3 101 aa12.42□□□□□ -0.42
PTPN18-201ENST00000175756 ZNF702PQ9H963 129 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 SND1-IT1Q9HBX3 110 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 K7EQD1 137 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 SPANXDQ9BXN6 97 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 SPANXCQ9NY87 97 aa12.41□□□□□ -0.42
PTPN18-201ENST00000175756 LINC00242Q5T6M2 205 aa12.4□□□□□ -0.42
PTPN18-201ENST00000175756 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
PTPN18-201ENST00000175756 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
PTPN18-201ENST00000175756 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
PTPN18-201ENST00000175756 DEFB114Q30KQ6 69 aa12.4□□□□□ -0.43
PTPN18-201ENST00000175756 NDUFA1O15239 70 aa12.39□□□□□ -0.43
PTPN18-201ENST00000175756 XCL1P47992 114 aa12.39□□□□□ -0.43
PTPN18-201ENST00000175756 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
PTPN18-201ENST00000175756 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
PTPN18-201ENST00000175756 IGKV3D-7A0A0C4DH55 119 aa12.38□□□□□ -0.43
PTPN18-201ENST00000175756 FLNAP21333 2647 aaKnown RBP12.38□□□□□ -0.43
PTPN18-201ENST00000175756 COX7A2LO14548 114 aa12.38□□□□□ -0.43
PTPN18-201ENST00000175756 ITPR3Q14573 2671 aa12.38□□□□□ -0.43
PTPN18-201ENST00000175756 CCL24O00175 119 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms