RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr1102Q8VES2 324 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 GlrxQ9QUH0 107 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm15292L7N231 93 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ifna5P07349 189 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Defa26Q3L180 93 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Znrf2Q71FD5 238 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Higd1cQ76I25 96 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 GaptQ8CB93 157 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Q8CF25 301 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ankrd11E9Q4F7 2643 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Vmn1r78K7N608 313 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 1700009N14RikQ14AA6 216 aaKnown RBP12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Wfdc9Q3UW41 83 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Smug1Q6P5C5 279 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Pus1Q9WU56 423 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Med12A2AGH6 2190 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 AU041133A0A0J9YVH3 498 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Igkv1-131A0A140T8M8 120 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ifna14Q810G3 189 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 9230109A22RikQ8BHE6 111 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rnase2aQ8K196 155 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Vstm2aQ8R0A6 236 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Cml1Q9JIZ0 222 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 ArtnQ9Z0L2 224 aa12.64□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm5239D3YYZ2 122 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Edn3P48299 214 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Spem1Q5F289 310 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1246Q7TQZ6 314 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Sh3bgrl2Q8BG73 107 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Slc25a48Q8BW66 306 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm10309Q8C648 119 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Vmn1r62Q8R2C0 300 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1475Q8VEV6 314 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Igkv14-130A0A0G2JF45 117 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Vma21-psA0A140T8R2 101 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1024A2ASU7 327 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Prss32E9Q409 334 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm21775J3KMK6 180 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm21834J3QN05 151 aa12.63□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ighv3-4A0A0A6YXF1 117 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr609E9Q4X7 319 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 TecrQ9CY27 308 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tmem88Q9D0N8 159 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr364-ps1A0A140T8Q2 307 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Zfp980A2A9J5 645 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Mettl23A2AA28 253 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Adcyap1O70176 175 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1258Q8VGN6 311 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr577Q8VH11 312 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 AcanQ61282 2132 aaKnown RBP12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Chd8Q09XV5 2582 aaKnown RBP12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ighv1-39A0A075B5V5 117 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm44501A8R0T9 150 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tm4sf19E9Q9H8 206 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr624F8VQI7 308 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 P01724 129 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Hes1P35428 282 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Sult1a1P52840 291 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tmem167bQ80X45 74 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Nit1Q8VDK1 323 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1242Q8VGM6 306 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Chac2Q9CQG1 178 aa12.62□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tex54G3UW99 86 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 P01915 264 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 B020031M17RikQ3UT11 173 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tmem256Q5F285 113 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr1535Q7TQU0 326 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 GgctQ9D7X8 188 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Bhlha15Q9QYC3 197 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm17660B9UIU9 90 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ptbp1P17225 527 aaKnown RBP12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Evi2aP20934 223 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Kcnip4Q6PHZ8 250 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Elovl5Q8BHI7 299 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr509Q8VF20 321 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Olfr346Q8VGJ7 309 aa12.61□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tmem139E9PX92 214 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm10020E9QAZ2 204 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Trp53rkaQ5U452 244 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Cox19Q8K0C8 92 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Pitpnc1Q8K4R4 332 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Tp53rkQ99PW4 244 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Nicn1Q9CQM0 213 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Oxld1Q9CR10 201 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rpl15Q9CZM2 204 aaKnown RBP12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 PigpQ9JHG1 132 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Prrc2cQ3TLH4 2846 aaKnown RBP12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Ighv5-6A0A075B5Q0 117 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Gm12169F2Z474 250 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Hist1h2bfP10853 126 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Hist1h2bbQ64475 126 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Hist1h2bkQ8CGP1 126 aaKnown RBP12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Hist1h2bpQ8CGP2 126 aaKnown RBP12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 SpartQ8R1X6 671 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Nbeal1E9PYP2 2688 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rhox4gQ2MDF7 205 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rhox4dQ2MDG0 205 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Rhox4eQ504P9 205 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Lelp1Q9DAE3 120 aa12.6□□□□□ -0.39
Trim39-203ENSMUST00000113706 Cnih1O35372 144 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms