RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A YLR046CQ12253 270 aa8.4□□□□□ -1.06
TGA1tA(UGC)A IRA1P18963 3092 aa8.39□□□□□ -1.07
TGA1tA(UGC)A ENO1P00924 437 aaKnown RBP8.39□□□□□ -1.07
TGA1tA(UGC)A MIS1P09440 975 aaKnown RBP8.39□□□□□ -1.07
TGA1tA(UGC)A GEX1P25596 615 aa8.39□□□□□ -1.07
TGA1tA(UGC)A YCR015CP25616 317 aa8.39□□□□□ -1.07
TGA1tA(UGC)A YJU3P28321 313 aa8.39□□□□□ -1.07
TGA1tA(UGC)A SPC110P32380 944 aa8.39□□□□□ -1.07
TGA1tA(UGC)A KAR9P32526 644 aa8.39□□□□□ -1.07
TGA1tA(UGC)A GEX2P36173 615 aa8.39□□□□□ -1.07
TGA1tA(UGC)A APM3P38153 483 aa8.39□□□□□ -1.07
TGA1tA(UGC)A RRT2P38332 387 aa8.39□□□□□ -1.07
TGA1tA(UGC)A AIM18P38884 321 aa8.39□□□□□ -1.07
TGA1tA(UGC)A SPC72P39723 622 aa8.39□□□□□ -1.07
TGA1tA(UGC)A AMA1P50082 593 aa8.39□□□□□ -1.07
TGA1tA(UGC)A KAP114P53067 1004 aa8.39□□□□□ -1.07
TGA1tA(UGC)A NOG2P53742 486 aaKnown RBP8.39□□□□□ -1.07
TGA1tA(UGC)A INA17Q02888 182 aa8.39□□□□□ -1.07
TGA1tA(UGC)A PIR1Q03178 341 aa8.39□□□□□ -1.07
TGA1tA(UGC)A NGL3Q03210 505 aa8.39□□□□□ -1.07
TGA1tA(UGC)A ADI1Q03677 179 aa8.39□□□□□ -1.07
TGA1tA(UGC)A RKM2Q03942 479 aa8.39□□□□□ -1.07
TGA1tA(UGC)A RSB1Q08417 382 aa8.39□□□□□ -1.07
TGA1tA(UGC)A YBL055CP34220 418 aaPredicted RBP8.38□□□□□ -1.07
TGA1tA(UGC)A MAP2P38174 421 aaKnown RBP8.38□□□□□ -1.07
TGA1tA(UGC)A GIP1P38229 639 aa8.38□□□□□ -1.07
TGA1tA(UGC)A MCX1P38323 520 aaPredicted RBP8.38□□□□□ -1.07
TGA1tA(UGC)A SAK1P38990 1142 aa8.38□□□□□ -1.07
TGA1tA(UGC)A GDH3P39708 457 aa8.38□□□□□ -1.07
TGA1tA(UGC)A ARG2P40360 574 aa8.38□□□□□ -1.07
TGA1tA(UGC)A RRN7P40992 514 aa8.38□□□□□ -1.07
TGA1tA(UGC)A CNN1P43618 361 aa8.38□□□□□ -1.07
TGA1tA(UGC)A AAT2P23542 418 aaKnown RBP8.37□□□□□ -1.07
TGA1tA(UGC)A ADY2P25613 283 aa8.37□□□□□ -1.07
TGA1tA(UGC)A MEI4P29467 408 aa8.37□□□□□ -1.07
TGA1tA(UGC)A PCA1P38360 1216 aa8.37□□□□□ -1.07
TGA1tA(UGC)A SEC9P40357 651 aa8.37□□□□□ -1.07
TGA1tA(UGC)A AIM23P47015 356 aa8.37□□□□□ -1.07
TGA1tA(UGC)A TCB2P48231 1178 aa8.37□□□□□ -1.07
TGA1tA(UGC)A RFX1P48743 811 aa8.37□□□□□ -1.07
TGA1tA(UGC)A PEX13P80667 386 aa8.37□□□□□ -1.07
TGA1tA(UGC)A THI7Q05998 598 aa8.37□□□□□ -1.07
TGA1tA(UGC)A LCB5Q06147 687 aaKnown RBP8.37□□□□□ -1.07
TGA1tA(UGC)A PYC1P11154 1178 aaKnown RBP8.36□□□□□ -1.07
TGA1tA(UGC)A DAL81P21657 970 aa8.36□□□□□ -1.07
TGA1tA(UGC)A TYE7P33122 291 aaPredicted RBP8.36□□□□□ -1.07
TGA1tA(UGC)A TCD2P36101 447 aaKnown RBP8.36□□□□□ -1.07
TGA1tA(UGC)A PIK1P39104 1066 aa8.36□□□□□ -1.07
TGA1tA(UGC)A YEL028WP39989 153 aa8.36□□□□□ -1.07
TGA1tA(UGC)A LCP5P40079 357 aaPredicted RBP8.36□□□□□ -1.07
TGA1tA(UGC)A EMW1P42842 904 aaKnown RBP8.36□□□□□ -1.07
TGA1tA(UGC)A DLD2P46681 530 aaKnown RBP8.36□□□□□ -1.07
TGA1tA(UGC)A RPS10BP46784 105 aaKnown RBP8.36□□□□□ -1.07
TGA1tA(UGC)A NRD1P53617 575 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
TGA1tA(UGC)A YNR063WP53749 607 aa8.36□□□□□ -1.07
TGA1tA(UGC)A PRM1P53835 661 aa8.36□□□□□ -1.07
TGA1tA(UGC)A JJJ1P53863 590 aa8.36□□□□□ -1.07
TGA1tA(UGC)A YMR187CQ03236 431 aa8.36□□□□□ -1.07
TGA1tA(UGC)A TPO1Q07824 586 aa8.36□□□□□ -1.07
TGA1tA(UGC)A PEX15Q08215 383 aa8.36□□□□□ -1.07
TGA1tA(UGC)A RPS10AQ08745 105 aaPredicted RBP8.36□□□□□ -1.07
TGA1tA(UGC)A OCA6Q12454 224 aa8.36□□□□□ -1.07
TGA1tA(UGC)A YLR462WO13556 202 aa8.35□□□□□ -1.07
TGA1tA(UGC)A TUB3P09734 445 aaKnown RBP8.35□□□□□ -1.07
TGA1tA(UGC)A MRPL8P22353 238 aa8.35□□□□□ -1.07
TGA1tA(UGC)A MRPL40P36534 297 aa8.35□□□□□ -1.07
TGA1tA(UGC)A YHL049CP38722 271 aa8.35□□□□□ -1.07
TGA1tA(UGC)A PPE1P38796 400 aa8.35□□□□□ -1.07
TGA1tA(UGC)A FLC2P39719 783 aa8.35□□□□□ -1.07
TGA1tA(UGC)A GIP4P39732 760 aa8.35□□□□□ -1.07
TGA1tA(UGC)A ATM1P40416 690 aa8.35□□□□□ -1.07
TGA1tA(UGC)A MVP1P40959 511 aaKnown RBP8.35□□□□□ -1.07
TGA1tA(UGC)A YFL064CP43540 174 aa8.35□□□□□ -1.07
TGA1tA(UGC)A MNN11P46985 422 aaKnown RBP8.35□□□□□ -1.07
TGA1tA(UGC)A YJL132WP47014 750 aa8.35□□□□□ -1.07
TGA1tA(UGC)A IPI3P53877 555 aa8.35□□□□□ -1.07
TGA1tA(UGC)A BOP3P53958 396 aa8.35□□□□□ -1.07
TGA1tA(UGC)A VPS9P54787 451 aa8.35□□□□□ -1.07
TGA1tA(UGC)A JIP5Q06214 492 aaPredicted RBP8.35□□□□□ -1.07
TGA1tA(UGC)A PEX11Q12462 236 aa8.35□□□□□ -1.07
TGA1tA(UGC)A YBL111CQ3E7Y5 667 aa8.35□□□□□ -1.07
TGA1tA(UGC)A PMS1P14242 873 aa8.34□□□□□ -1.07
TGA1tA(UGC)A CKI1P20485 582 aa8.34□□□□□ -1.07
TGA1tA(UGC)A GUT1P32190 709 aa8.34□□□□□ -1.07
TGA1tA(UGC)A STO1P34160 861 aaKnown RBP8.34□□□□□ -1.07
TGA1tA(UGC)A ALY1P36117 915 aa8.34□□□□□ -1.07
TGA1tA(UGC)A BIT2P38346 545 aa8.34□□□□□ -1.07
TGA1tA(UGC)A SRP68P38687 599 aaKnown RBP8.34□□□□□ -1.07
TGA1tA(UGC)A END3P39013 349 aa8.34□□□□□ -1.07
TGA1tA(UGC)A SAW1P39735 261 aa8.34□□□□□ -1.07
TGA1tA(UGC)A STL1P39932 569 aa8.34□□□□□ -1.07
TGA1tA(UGC)A ASN2P49090 572 aaKnown RBP8.34□□□□□ -1.07
TGA1tA(UGC)A NPY1P53164 384 aa8.34□□□□□ -1.07
TGA1tA(UGC)A GND2P53319 492 aa8.34□□□□□ -1.07
TGA1tA(UGC)A HEL2Q05580 639 aaKnown RBP8.34□□□□□ -1.07
TGA1tA(UGC)A SWC7Q06707 132 aa8.34□□□□□ -1.07
TGA1tA(UGC)A YDR018CQ12185 396 aa8.34□□□□□ -1.07
TGA1tA(UGC)A AFI1Q99222 893 aa8.34□□□□□ -1.07
TGA1tA(UGC)A RPL40AP0CH08 128 aaKnown RBP8.33□□□□□ -1.08
TGA1tA(UGC)A RPL40BP0CH09 128 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms