RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C AAD4Q07747 329 aa8.46□□□□□ -1.06
SOD2YHR008C ATG10Q07879 167 aa8.46□□□□□ -1.06
SOD2YHR008C RPS3P05750 240 aaKnown RBP8.45□□□□□ -1.06
SOD2YHR008C MIS1P09440 975 aaKnown RBP8.45□□□□□ -1.06
SOD2YHR008C PXL1P36166 706 aa8.45□□□□□ -1.06
SOD2YHR008C EDC3P39998 551 aaKnown RBP8.45□□□□□ -1.06
SOD2YHR008C SNG1P46950 547 aa8.45□□□□□ -1.06
SOD2YHR008C NBP35P52920 328 aa8.45□□□□□ -1.06
SOD2YHR008C MNT2P53059 558 aa8.45□□□□□ -1.06
SOD2YHR008C YDR131CQ03899 556 aa8.45□□□□□ -1.06
SOD2YHR008C TFB4Q12004 338 aa8.45□□□□□ -1.06
SOD2YHR008C FRE7Q12333 620 aa8.45□□□□□ -1.06
SOD2YHR008C EMP46Q12396 444 aa8.45□□□□□ -1.06
SOD2YHR008C HIS1P00498 297 aaKnown RBP8.44□□□□□ -1.06
SOD2YHR008C INH1P01097 85 aa8.44□□□□□ -1.06
SOD2YHR008C SRB2P34162 210 aa8.44□□□□□ -1.06
SOD2YHR008C ADD66P36040 267 aa8.44□□□□□ -1.06
SOD2YHR008C KAP104P38217 918 aaKnown RBP8.44□□□□□ -1.06
SOD2YHR008C QNS1P38795 714 aaKnown RBP8.44□□□□□ -1.06
SOD2YHR008C PRM9P39551 298 aa8.44□□□□□ -1.06
SOD2YHR008C PHO86P46956 311 aa8.44□□□□□ -1.06
SOD2YHR008C PEX31P53203 462 aa8.44□□□□□ -1.06
SOD2YHR008C YMR178WQ03219 274 aaKnown RBP8.44□□□□□ -1.06
SOD2YHR008C ARA2Q04212 335 aa8.44□□□□□ -1.06
SOD2YHR008C YML082WQ04533 649 aaKnown RBP8.44□□□□□ -1.06
SOD2YHR008C YOL036WQ08206 761 aa8.44□□□□□ -1.06
SOD2YHR008C YOL073CQ08232 322 aa8.44□□□□□ -1.06
SOD2YHR008C SST2P11972 698 aaKnown RBP8.43□□□□□ -1.06
SOD2YHR008C SNT1P25357 1226 aa8.43□□□□□ -1.06
SOD2YHR008C APL1P27351 700 aa8.43□□□□□ -1.06
SOD2YHR008C KAR9P32526 644 aa8.43□□□□□ -1.06
SOD2YHR008C SAC6P32599 642 aaKnown RBP8.43□□□□□ -1.06
SOD2YHR008C SRP68P38687 599 aaKnown RBP8.43□□□□□ -1.06
SOD2YHR008C BCD1P38772 366 aa8.43□□□□□ -1.06
SOD2YHR008C LSC2P53312 427 aa8.43□□□□□ -1.06
SOD2YHR008C MCP2Q06567 569 aa8.43□□□□□ -1.06
SOD2YHR008C YDL073WQ07454 984 aa8.43□□□□□ -1.06
SOD2YHR008C YKR104WP0CE69 306 aa8.42□□□□□ -1.06
SOD2YHR008C MTF2P10849 440 aa8.42□□□□□ -1.06
SOD2YHR008C MET16P18408 261 aaPredicted RBP8.42□□□□□ -1.06
SOD2YHR008C MRPL8P22353 238 aa8.42□□□□□ -1.06
SOD2YHR008C MNE1P24720 663 aa8.42□□□□□ -1.06
SOD2YHR008C FUI1P38196 639 aa8.42□□□□□ -1.06
SOD2YHR008C EFM2P38347 419 aa8.42□□□□□ -1.06
SOD2YHR008C FSH1P38777 243 aaKnown RBP8.42□□□□□ -1.06
SOD2YHR008C LYS9P38999 446 aa8.42□□□□□ -1.06
SOD2YHR008C RAD26P40352 1085 aa8.42□□□□□ -1.06
SOD2YHR008C YJR124CP47159 448 aa8.42□□□□□ -1.06
SOD2YHR008C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
SOD2YHR008C PUT4P15380 627 aa8.41□□□□□ -1.06
SOD2YHR008C NAR1P23503 491 aaKnown RBP8.41□□□□□ -1.06
SOD2YHR008C PPH21P23594 369 aa8.41□□□□□ -1.06
SOD2YHR008C TFC3P34111 1160 aa8.41□□□□□ -1.06
SOD2YHR008C SPT8P38915 602 aa8.41□□□□□ -1.06
SOD2YHR008C CNN1P43618 361 aa8.41□□□□□ -1.06
SOD2YHR008C NUP85P46673 744 aa8.41□□□□□ -1.06
SOD2YHR008C INP2Q03824 705 aa8.41□□□□□ -1.06
SOD2YHR008C YDR444WQ04093 687 aa8.41□□□□□ -1.06
SOD2YHR008C PPN1Q04119 674 aa8.41□□□□□ -1.06
SOD2YHR008C GRX8Q05926 109 aa8.41□□□□□ -1.06
SOD2YHR008C YOL024WQ08172 172 aa8.41□□□□□ -1.06
SOD2YHR008C AIM39Q08223 395 aa8.41□□□□□ -1.06
SOD2YHR008C CIR2Q08822 631 aa8.41□□□□□ -1.06
SOD2YHR008C VPS5Q92331 675 aa8.41□□□□□ -1.06
SOD2YHR008C CDC33P07260 213 aaKnown RBP8.4□□□□□ -1.06
SOD2YHR008C CBR1P38626 284 aaKnown RBP8.4□□□□□ -1.06
SOD2YHR008C TMA108P40462 946 aa8.4□□□□□ -1.06
SOD2YHR008C SAP185P40856 1058 aa8.4□□□□□ -1.06
SOD2YHR008C CIR1P42940 261 aa8.4□□□□□ -1.06
SOD2YHR008C RPS10BP46784 105 aaKnown RBP8.4□□□□□ -1.06
SOD2YHR008C SET2P46995 733 aaKnown RBP8.4□□□□□ -1.06
SOD2YHR008C IPI3P53877 555 aa8.4□□□□□ -1.06
SOD2YHR008C RPL34AP87262 121 aaPredicted RBP8.4□□□□□ -1.06
SOD2YHR008C POB3Q04636 552 aaKnown RBP8.4□□□□□ -1.06
SOD2YHR008C YPR114WQ06107 315 aa8.4□□□□□ -1.06
SOD2YHR008C RPS10AQ08745 105 aaPredicted RBP8.4□□□□□ -1.06
SOD2YHR008C AIP1P46680 615 aaKnown RBP8.39□□□□□ -1.07
SOD2YHR008C ESBP6P53918 673 aa8.39□□□□□ -1.07
SOD2YHR008C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07 RIP-Chip
SOD2YHR008C KAP95Q06142 861 aaKnown RBP8.39□□□□□ -1.07
SOD2YHR008C TRE2Q08693 809 aa8.39□□□□□ -1.07
SOD2YHR008C LEU1P07264 779 aaKnown RBP8.38□□□□□ -1.07
SOD2YHR008C BIK1P11709 440 aa8.38□□□□□ -1.07
SOD2YHR008C MSH3P25336 1018 aa8.38□□□□□ -1.07
SOD2YHR008C YKT6P36015 200 aaKnown RBP8.38□□□□□ -1.07
SOD2YHR008C PIM1P36775 1133 aa8.38□□□□□ -1.07
SOD2YHR008C CCT6P39079 546 aa8.38□□□□□ -1.07
SOD2YHR008C YER189WP40104 122 aa8.38□□□□□ -1.07
SOD2YHR008C RRN7P40992 514 aa8.38□□□□□ -1.07
SOD2YHR008C EMW1P42842 904 aaKnown RBP8.38□□□□□ -1.07
SOD2YHR008C SNZ3P43545 298 aa8.38□□□□□ -1.07
SOD2YHR008C UBX6P47049 396 aa8.38□□□□□ -1.07
SOD2YHR008C YGR237CP50089 785 aa8.38□□□□□ -1.07
SOD2YHR008C SNZ2P53824 298 aa8.38□□□□□ -1.07
SOD2YHR008C EGD1Q02642 157 aaKnown RBP8.38□□□□□ -1.07
SOD2YHR008C SND1Q04007 877 aa8.38□□□□□ -1.07
SOD2YHR008C VID22Q05934 901 aa8.38□□□□□ -1.07
SOD2YHR008C CDA2Q06703 312 aa8.38□□□□□ -1.07
SOD2YHR008C BSC6Q08280 497 aa8.38□□□□□ -1.07
SOD2YHR008C FAU1P40099 211 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms