RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZBED3Q96IU2 234 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-228ENST00000641847 PRO3102Q9H379 93 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 BIN2Q9UBW5 565 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-228ENST00000641847 CSADQ9Y600 493 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 CLRN2A0PK11 232 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 TLR2O60603 784 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 GLRX3O76003 335 aaKnown RBP11.41□□□□□ -0.58
PHGDH-228ENST00000641847 GJB1P08034 283 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 CAPN2P17655 700 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 ATP5JP18859 108 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 GJA5P36382 358 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 PHKA1P46020 1223 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 GYG1P46976 350 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 GJA8P48165 433 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 RBM5P52756 815 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHGDH-228ENST00000641847 UBXN2AP68543 259 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 CAVIN4Q5BKX8 364 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 NBPF12Q5TAG4 269 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-228ENST00000641847 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
PHGDH-228ENST00000641847 ZCCHC17Q9NP64 241 aaKnown RBP11.41□□□□□ -0.58
PHGDH-228ENST00000641847 PSME4Q14997 1843 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 UQCRFS1P1P0C7P4 283 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 CETPP11597 493 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 GSPT1P15170 499 aaKnown RBP11.4□□□□□ -0.58
PHGDH-228ENST00000641847 GRK4P32298 578 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 BCAMP50895 628 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 CAP1Q01518 475 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 RASA3Q14644 834 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
PHGDH-228ENST00000641847 TXNRD3Q86VQ6 643 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 DEFB123Q8N688 67 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.4□□□□□ -0.58
PHGDH-228ENST00000641847 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 FAM84BQ96KN1 310 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-228ENST00000641847 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 BOLA2Q9H3K6 86 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 AK9Q5TCS8 1911 aa11.4□□□□□ -0.58
PHGDH-228ENST00000641847 LAMA2P24043 3122 aaKnown RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 FARP2O94887 1054 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 FMNL1O95466 1100 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 MAP4K4O95819 1239 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 MAP3K9P80192 1104 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 MTFR1Q15390 333 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 CFAP100Q494V2 611 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 FBXO33Q7Z6M2 555 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 ZNF512BQ96KM6 892 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
PHGDH-228ENST00000641847 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
PHGDH-228ENST00000641847 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-228ENST00000641847 CCL5P13501 91 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 MCAMP43121 646 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 RASGRF1Q13972 1273 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 LRCH3Q96II8 777 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 HAUS7Q99871 368 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
PHGDH-228ENST00000641847 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-228ENST00000641847 SSC5DA1L4H1 1573 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-228ENST00000641847 SDSP20132 328 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 PSMC4P43686 418 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 TNNI2P48788 182 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 SNAPC2Q13487 334 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 PI16Q6UXB8 463 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 UBE2Q1Q7Z7E8 422 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 SPATA5Q8NB90 893 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 ARHGAP39Q9C0H5 1083 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 CD209Q9NNX6 404 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 HMG20BQ9P0W2 317 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
PHGDH-228ENST00000641847 MAST2Q6P0Q8 1798 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 GOLIM4O00461 696 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 SEMA3EO15041 775 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-228ENST00000641847 ZAP70P43403 619 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 FKBP1AP62942 108 aaKnown RBP11.36□□□□□ -0.59
PHGDH-228ENST00000641847 VGLL4Q14135 290 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
PHGDH-228ENST00000641847 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 HOOK2Q96ED9 719 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
PHGDH-228ENST00000641847 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-228ENST00000641847 PAG1Q9NWQ8 432 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
PHGDH-228ENST00000641847 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms