RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PDHXO00330 501 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 ALDH1L1O75891 902 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 KCNJ4P48050 445 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 LRIT3Q3SXY7 679 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 TMEM57Q8N5G2 664 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 PANK1Q8TE04 598 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 MRIQ9BWK5 157 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 RNF208Q9H0X6 261 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 CHD7Q9P2D1 2997 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 STXBP5LQ9Y2K9 1186 aa9.27□□□□□ -0.93
PHGDH-225ENST00000641720 ZNFX1Q9P2E3 1918 aaKnown RBP9.27□□□□□ -0.93
PHGDH-225ENST00000641720 GRM8O00222 908 aa9.26□□□□□ -0.93
PHGDH-225ENST00000641720 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
PHGDH-225ENST00000641720 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-225ENST00000641720 RBM5P52756 815 aaKnown RBP eCLIP9.26□□□□□ -0.93
PHGDH-225ENST00000641720 RRP1P56182 461 aaKnown RBP9.26□□□□□ -0.93
PHGDH-225ENST00000641720 IRF5Q13568 498 aa9.26□□□□□ -0.93
PHGDH-225ENST00000641720 LMBR1LQ6UX01 489 aa9.26□□□□□ -0.93
PHGDH-225ENST00000641720 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
PHGDH-225ENST00000641720 GBF1Q92538 1859 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 INHAP05111 366 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 NBPF7P0C2Y1 421 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-225ENST00000641720 CYP2C8P10632 490 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 ELNP15502 786 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 HIBADHP31937 336 aaKnown RBP9.25□□□□□ -0.93
PHGDH-225ENST00000641720 MAP3K10Q02779 954 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 NFIAQ12857 509 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 IFIT5Q13325 482 aaKnown RBP9.25□□□□□ -0.93
PHGDH-225ENST00000641720 KIF22Q14807 665 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 RAET1EQ8TD07 263 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 PXYLP1Q8TE99 480 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 MEIS3Q99687 375 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 USP44Q9H0E7 712 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 NR2E3Q9Y5X4 410 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 SMCHD1A6NHR9 2005 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 UTYO14607 1347 aa9.25□□□□□ -0.93
PHGDH-225ENST00000641720 TRANK1O15050 2925 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 A0A0G2JLL6 359 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 ADCY3O60266 1144 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 SLURP2P0DP57 97 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 FGFR2P21802 821 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 TNNI2P48788 182 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 FLT3LGP49771 235 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 BCAMP50895 628 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 RABL6Q3YEC7 729 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 LDHAL6AQ6ZMR3 332 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 MIGA2Q7L4E1 593 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 PRRT2Q7Z6L0 340 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 SUCLG2Q96I99 432 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 PAWRQ96IZ0 340 aaKnown RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 ZNF341Q9BYN7 854 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 C9orf78Q9NZ63 289 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-225ENST00000641720 PFASO15067 1338 aa9.24□□□□□ -0.93
PHGDH-225ENST00000641720 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-225ENST00000641720 UBXN2AP68543 259 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 HHIPL2Q6UWX4 724 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 ITPRIPQ8IWB1 547 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 ZFPM1Q8IX07 1006 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 DEFB123Q8N688 67 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 ANKRD44Q8N8A2 993 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 FAM151AQ8WW52 585 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 TEKT1Q969V4 418 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 DEFB118Q96PH6 123 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 DAGLAQ9Y4D2 1042 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 MYH1P12882 1939 aa9.23□□□□□ -0.93
PHGDH-225ENST00000641720 A0A0G2JMZ2 1700 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 ZNF236Q9UL36 1845 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 EVI5O60447 810 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 COL6A1P12109 1028 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 CAPN2P17655 700 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 HOXD10P28358 340 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 MAGEA10P43363 369 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-225ENST00000641720 FCGRTP55899 365 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 TRIM32Q13049 653 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 LRRC24Q50LG9 513 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 PARK7Q99497 189 aaKnown RBP9.22□□□□□ -0.93
PHGDH-225ENST00000641720 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-225ENST00000641720 GJD2Q9UKL4 321 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 SLC45A1Q9Y2W3 748 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 SUGT1Q9Y2Z0 365 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 AFG3L2Q9Y4W6 797 aa9.22□□□□□ -0.93
PHGDH-225ENST00000641720 POTEB2H3BUK9 544 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 CXCL11O14625 94 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 UBTFL1P0CB47 393 aaPredicted RBP9.21□□□□□ -0.94
PHGDH-225ENST00000641720 PDE3AQ14432 1141 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.94
PHGDH-225ENST00000641720 MAP3K21Q5TCX8 1036 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 CDC42EP5Q6NZY7 148 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 TDHQ8IZJ6 230 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 TBC1D22AQ8WUA7 517 aa9.21□□□□□ -0.94
PHGDH-225ENST00000641720 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms