RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
CASC19-227ENST00000641411 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
CASC19-227ENST00000641411 RHPN1Q8TCX5 695 aa9.55□□□□□ -0.88
CASC19-227ENST00000641411 GCC1Q96CN9 775 aa9.55□□□□□ -0.88
CASC19-227ENST00000641411 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
CASC19-227ENST00000641411 DYRK3O43781 588 aa9.54□□□□□ -0.88
CASC19-227ENST00000641411 TYRO3Q06418 890 aa9.54□□□□□ -0.88
CASC19-227ENST00000641411 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
CASC19-227ENST00000641411 AKAP4Q5JQC9 854 aa9.54□□□□□ -0.88
CASC19-227ENST00000641411 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 RGS3P49796 1198 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 CLDN10P78369 228 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 NUCB1Q02818 461 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 CCDC30Q5VVM6 783 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 NBPF6Q5VWK0 638 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 IL17REQ8NFR9 667 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 ADAMTS19Q8TE59 1207 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 ANP32EQ9BTT0 268 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 KRTAP9-2Q9BYQ4 174 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 TSPAN10Q9H1Z9 355 aaPredicted RBP9.53□□□□□ -0.88
CASC19-227ENST00000641411 BRD7Q9NPI1 651 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
CASC19-227ENST00000641411 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
CASC19-227ENST00000641411 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
CASC19-227ENST00000641411 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
CASC19-227ENST00000641411 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.89
CASC19-227ENST00000641411 PARP4Q9UKK3 1724 aaKnown RBP9.52□□□□□ -0.89
CASC19-227ENST00000641411 SPATA31A3Q5VYP0 1347 aa9.52□□□□□ -0.89
CASC19-227ENST00000641411 SCN11AQ9UI33 1791 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
CASC19-227ENST00000641411 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
CASC19-227ENST00000641411 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
CASC19-227ENST00000641411 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 RPAP2Q8IXW5 612 aaPredicted RBP9.51□□□□□ -0.89
CASC19-227ENST00000641411 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 UCN2Q96RP3 112 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
CASC19-227ENST00000641411 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
CASC19-227ENST00000641411 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 USP17L3A6NCW0 530 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 USP17L4A6NCW7 530 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 USP17L1Q7RTZ2 530 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 RAB44Q7Z6P3 723 aaPredicted RBP9.5□□□□□ -0.89
CASC19-227ENST00000641411 SKAP1Q86WV1 359 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 SIX5Q8N196 739 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 LTV1Q96GA3 475 aaPredicted RBP9.5□□□□□ -0.89
CASC19-227ENST00000641411 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 MRC1P22897 1456 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 ABCA3Q99758 1704 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
CASC19-227ENST00000641411 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
CASC19-227ENST00000641411 DKK1O94907 266 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 KRT24Q2M2I5 525 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
CASC19-227ENST00000641411 ILDR2Q71H61 639 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 SUSD3Q96L08 255 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 CEP63Q96MT8 703 aa9.49□□□□□ -0.89
CASC19-227ENST00000641411 RNMTO43148 476 aaKnown RBP9.48□□□□□ -0.89
CASC19-227ENST00000641411 C21orf2O43822 256 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
CASC19-227ENST00000641411 GRIK4Q16099 956 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 C1orf141Q5JVX7 400 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 CHD1LQ86WJ1 897 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 STAG2Q8N3U4 1231 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 DCTPP1Q9H773 170 aa9.48□□□□□ -0.89
CASC19-227ENST00000641411 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 HSPA2P54652 639 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 XPCQ01831 940 aaPredicted RBP9.47□□□□□ -0.89
CASC19-227ENST00000641411 FLIIQ13045 1269 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 ADGRE1Q14246 886 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 BRINP3Q76B58 766 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 LRRC59Q96AG4 307 aaKnown RBP9.47□□□□□ -0.89
CASC19-227ENST00000641411 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
CASC19-227ENST00000641411 KRTAP9-6A0A140TA67 174 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
CASC19-227ENST00000641411 POM121CA8CG34 1229 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 ATP9BO43861 1147 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 LILRB5O75023 590 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 HMMRO75330 724 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 GNAI3P08754 354 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 TEFQ10587 303 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.9
CASC19-227ENST00000641411 OGFOD1Q8N543 542 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms