RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MPHOSPH8Q99549 860 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCARB2-226ENST00000640916 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 PHIPQ8WWQ0 1821 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 TNNI2P48788 182 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 KSR2Q6VAB6 950 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 MIGA2Q7L4E1 593 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-226ENST00000640916 ZNF112Q9UJU3 913 aa10.43□□□□□ -0.74
SCARB2-226ENST00000640916 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-226ENST00000640916 PLA2G5P39877 138 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-226ENST00000640916 TRIM32Q13049 653 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 FAM83AQ86UY5 434 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 CCDC146Q8IYE0 955 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-226ENST00000640916 DCBLD2Q96PD2 775 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 PARK7Q99497 189 aaKnown RBP10.42□□□□□ -0.74
SCARB2-226ENST00000640916 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
SCARB2-226ENST00000640916 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
SCARB2-226ENST00000640916 C8orf58Q8NAV2 365 aa10.41□□□□□ -0.74
SCARB2-226ENST00000640916 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
SCARB2-226ENST00000640916 OGDHLQ9ULD0 1010 aa10.41□□□□□ -0.74
SCARB2-226ENST00000640916 RPAP1Q9BWH6 1393 aaPredicted RBP10.4□□□□□ -0.74
SCARB2-226ENST00000640916 LTBP2Q14767 1821 aa10.4□□□□□ -0.74
SCARB2-226ENST00000640916 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.74
SCARB2-226ENST00000640916 COL6A1P12109 1028 aa10.4□□□□□ -0.74
SCARB2-226ENST00000640916 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
SCARB2-226ENST00000640916 FKBP1CQ5VVH2 108 aa10.4□□□□□ -0.74
SCARB2-226ENST00000640916 APOBEC3HQ6NTF7 200 aaKnown RBP10.4□□□□□ -0.74
SCARB2-226ENST00000640916 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
SCARB2-226ENST00000640916 ZNF341Q9BYN7 854 aa10.4□□□□□ -0.74
SCARB2-226ENST00000640916 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
SCARB2-226ENST00000640916 MAST2Q6P0Q8 1798 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 CXCL11O14625 94 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 TNPO2O14787 897 aaKnown RBP10.39□□□□□ -0.75
SCARB2-226ENST00000640916 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
SCARB2-226ENST00000640916 GYG1P46976 350 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 FOXO4P98177 505 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
SCARB2-226ENST00000640916 GCKRQ14397 625 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 LRRC26Q2I0M4 334 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
SCARB2-226ENST00000640916 ZDHHC15Q96MV8 337 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 TTYH1Q9H313 450 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-226ENST00000640916 GJD2Q9UKL4 321 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 FRMPD3Q5JV73 1810 aa10.39□□□□□ -0.75
SCARB2-226ENST00000640916 A0A0G2JLL6 359 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-226ENST00000640916 ANKRD18BA2A2Z9 1011 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 TNFRSF10AO00220 468 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 ZNF697Q5TEC3 545 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 DCAF15Q66K64 600 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 G2E3Q7L622 706 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 PRRT2Q7Z6L0 340 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-226ENST00000640916 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 MYLIPQ8WY64 445 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
SCARB2-226ENST00000640916 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
SCARB2-226ENST00000640916 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 PLIN1O60240 522 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 HMGCRP04035 888 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 HIBADHP31937 336 aaKnown RBP10.37□□□□□ -0.75
SCARB2-226ENST00000640916 MAP3K21Q5TCX8 1036 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 HOOK2Q96ED9 719 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-226ENST00000640916 HMX1Q9NP08 348 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-226ENST00000640916 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 AFG3L2Q9Y4W6 797 aa10.37□□□□□ -0.75
SCARB2-226ENST00000640916 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 CCDC30Q5VVM6 783 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 FBXO33Q7Z6M2 555 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 ANKRD13CQ8N6S4 541 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 USP38Q8NB14 1042 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 TRIB2Q92519 343 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 TEKT1Q969V4 418 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 RUNDC1Q96C34 613 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 ATRNL1Q5VV63 1379 aa10.36□□□□□ -0.75
SCARB2-226ENST00000640916 DOCK2Q92608 1830 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 C7P10643 843 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
SCARB2-226ENST00000640916 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 EPHA10Q5JZY3 1008 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 LHX8Q68G74 356 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
SCARB2-226ENST00000640916 ZFPM1Q8IX07 1006 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 FAM151AQ8WW52 585 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 COA7Q96BR5 231 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 IQSEC3Q9UPP2 1182 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-226ENST00000640916 ZHX2Q9Y6X8 837 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 DOCK1Q14185 1865 aa10.35□□□□□ -0.75
SCARB2-226ENST00000640916 SLURP2P0DP57 97 aa10.34□□□□□ -0.75
SCARB2-226ENST00000640916 PTPRAP18433 802 aa10.34□□□□□ -0.75
SCARB2-226ENST00000640916 NFIAQ12857 509 aa10.34□□□□□ -0.75
SCARB2-226ENST00000640916 SHHQ15465 462 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms