RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MINDY4BA8MYZ0 360 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 FBXO38Q6PIJ6 1188 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 PIP4K2CQ8TBX8 421 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
NECAP1-227ENST00000640648 SPECC1L-ADORA2AF8WAN1 911 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 PSMD2Q13200 908 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 PPP2R5EQ16537 467 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 KCNH5Q8NCM2 988 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 ANKRD24Q8TF21 1146 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 ZNF213O14771 459 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 ATP5HO75947 161 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 RANBP1P43487 201 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 ADCY2Q08462 1091 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-227ENST00000640648 MICU3Q86XE3 530 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 SPDL1Q96EA4 605 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 CNOT10Q9H9A5 744 aaKnown RBP9.25□□□□□ -0.93
NECAP1-227ENST00000640648 MTUS1Q9ULD2 1270 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 MSH6P52701 1360 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 FAM173BQ6P4H8 233 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 ZBTB9Q96C00 473 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 TMEM63CQ9P1W3 806 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 FAM169AQ9Y6X4 670 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 PLCH2O75038 1416 aa9.25□□□□□ -0.93
NECAP1-227ENST00000640648 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 MRPS35P82673 323 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 TMTC1Q8IUR5 882 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 STAMBPL1Q96FJ0 436 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC43Q96MW1 224 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 NAPBQ9H115 298 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 FAM204AQ9H8W3 233 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 SSH2Q76I76 1423 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 KRT18P05783 430 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CETN2P41208 172 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 INAQ16352 499 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 MUM1Q2TAK8 710 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 LMBR1Q8WVP7 490 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 MRPS27Q92552 414 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 A1CFQ9NQ94 594 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CCT6AP40227 531 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CCT5P48643 541 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 APOBRQ0VD83 1088 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 ZNF653Q96CK0 615 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 E7ENQ6 273 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 STXBP3O00186 592 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 MAFGO15525 162 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 ABCD1P33897 745 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 NMIQ13287 307 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 NDUFA13Q9P0J0 144 aa9.24□□□□□ -0.93
NECAP1-227ENST00000640648 EIF2AK4Q9P2K8 1649 aaKnown RBP9.24□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC160A6NGH7 325 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 BMP15O95972 392 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 MSL3Q8N5Y2 521 aaKnown RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 AOPEPQ8N6M6 819 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 FAF1Q9UNN5 650 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 MAGI3Q5TCQ9 1506 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 PPIP5K1Q6PFW1 1433 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 EIF2S1P05198 315 aaKnown RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 PKP1Q13835 747 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 ZFYVE27Q5T4F4 411 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 PNMA8AQ86V59 439 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 PPP1R14BQ96C90 147 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 KLC4Q9NSK0 619 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 CDC23Q9UJX2 597 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 GOLGA8AA7E2F4 631 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 NDC80O14777 642 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 IFIT3O14879 490 aaKnown RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 PPP1R2P41236 205 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 SLC39A6Q13433 755 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 TRPC3Q13507 836 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 CWF19L2Q2TBE0 894 aaKnown RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 CCDC102BQ68D86 513 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 Q6ZUG5 572 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-227ENST00000640648 CBX8Q9HC52 389 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 RMND1Q9NWS8 449 aa9.23□□□□□ -0.93
NECAP1-227ENST00000640648 GADD45BO75293 160 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 GSTA2P09210 222 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 GPTP24298 496 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 JADE2Q9NQC1 790 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 UTP6Q9NYH9 597 aaKnown RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 AKAP2Q9Y2D5 859 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 KIAA0556O60303 1618 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 AKR1B15C9JRZ8 316 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-227ENST00000640648 PHACTR2O75167 634 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
NECAP1-227ENST00000640648 KIF5AQ12840 1032 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms