RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 FPGT-TNNI3KV9GXZ4 949 aa18.04■□□□□ 0.48
GFAP-236ENST00000640545 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
GFAP-236ENST00000640545 TLR2O60603 784 aa18.03■□□□□ 0.48
GFAP-236ENST00000640545 TBC1D9Q6ZT07 1266 aa18.03■□□□□ 0.48
GFAP-236ENST00000640545 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
GFAP-236ENST00000640545 NSUN4Q96CB9 384 aaKnown RBP18.03■□□□□ 0.48
GFAP-236ENST00000640545 PTPN22Q9Y2R2 807 aa18.03■□□□□ 0.48
GFAP-236ENST00000640545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.03■□□□□ 0.48
GFAP-236ENST00000640545 OTOFQ9HC10 1997 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 CXCL11O14625 94 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 IGSF3O75054 1194 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
GFAP-236ENST00000640545 BAG3O95817 575 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 MCAMP43121 646 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
GFAP-236ENST00000640545 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
GFAP-236ENST00000640545 RLBP1P12271 317 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 PLCG2P16885 1265 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 NAA16Q6N069 864 aaPredicted RBP18.01■□□□□ 0.47
GFAP-236ENST00000640545 FASTKD5Q7L8L6 764 aaKnown RBP18.01■□□□□ 0.47
GFAP-236ENST00000640545 ANKRD23Q86SG2 305 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 ERC1Q8IUD2 1116 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 SCYL3Q8IZE3 742 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 CHMP4BQ9H444 224 aaKnown RBP18.01■□□□□ 0.47
GFAP-236ENST00000640545 KCNH4Q9UQ05 1017 aa18.01■□□□□ 0.47
GFAP-236ENST00000640545 LAMB1P07942 1786 aa18■□□□□ 0.47
GFAP-236ENST00000640545 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
GFAP-236ENST00000640545 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
GFAP-236ENST00000640545 NBPF11Q86T75 865 aa18■□□□□ 0.47
GFAP-236ENST00000640545 ZNF512BQ96KM6 892 aaPredicted RBP18■□□□□ 0.47
GFAP-236ENST00000640545 DBNDD2Q9BQY9 259 aa18■□□□□ 0.47
GFAP-236ENST00000640545 SNRKQ9NRH2 765 aa18■□□□□ 0.47
GFAP-236ENST00000640545 ZHX2Q9Y6X8 837 aa18■□□□□ 0.47
GFAP-236ENST00000640545 MYH2Q9UKX2 1941 aa18■□□□□ 0.47
GFAP-236ENST00000640545 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
GFAP-236ENST00000640545 PHF20L1A8MW92 1017 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 PDHXO00330 501 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 GNRH1P01148 92 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 RHBDL3P58872 404 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
GFAP-236ENST00000640545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
GFAP-236ENST00000640545 DDX4Q9NQI0 724 aaKnown RBP17.99■□□□□ 0.47
GFAP-236ENST00000640545 TBC1D12O60347 775 aa17.98■□□□□ 0.47
GFAP-236ENST00000640545 PTPRAP18433 802 aa17.98■□□□□ 0.47
GFAP-236ENST00000640545 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
GFAP-236ENST00000640545 SH3BP5LQ7L8J4 393 aa17.98■□□□□ 0.47
GFAP-236ENST00000640545 PANK1Q8TE04 598 aa17.98■□□□□ 0.47
GFAP-236ENST00000640545 PARK7Q99497 189 aaKnown RBP17.98■□□□□ 0.47
GFAP-236ENST00000640545 RFX7Q2KHR2 1363 aa17.97■□□□□ 0.47
GFAP-236ENST00000640545 HOXD10P28358 340 aa17.97■□□□□ 0.47
GFAP-236ENST00000640545 LACTBP83111 547 aaPredicted RBP17.97■□□□□ 0.47
GFAP-236ENST00000640545 ZNF384Q8TF68 577 aa17.97■□□□□ 0.47
GFAP-236ENST00000640545 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
GFAP-236ENST00000640545 OSBPL5Q9H0X9 879 aaPredicted RBP17.97■□□□□ 0.47
GFAP-236ENST00000640545 DHX36Q9H2U1 1008 aaKnown RBP17.97■□□□□ 0.47
GFAP-236ENST00000640545 ATRNL1Q5VV63 1379 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 HMMRO75330 724 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 PRMT2P55345 433 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 TMEM106CQ9BVX2 250 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 AATFQ9NY61 560 aaKnown RBP eCLIP17.96■□□□□ 0.47
GFAP-236ENST00000640545 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
GFAP-236ENST00000640545 CYP2E1P05181 493 aaPredicted RBP17.95■□□□□ 0.46
GFAP-236ENST00000640545 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 GADL1Q6ZQY3 521 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 CERS3Q8IU89 383 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 ARMC5Q96C12 935 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 PI4KBQ9UBF8 816 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 CPA4Q9UI42 421 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 HERC5Q9UII4 1024 aaKnown RBP17.95■□□□□ 0.46
GFAP-236ENST00000640545 DBNLQ9UJU6 430 aaKnown RBP17.95■□□□□ 0.46
GFAP-236ENST00000640545 AFG3L2Q9Y4W6 797 aa17.95■□□□□ 0.46
GFAP-236ENST00000640545 A0A0G2JLL6 359 aaPredicted RBP17.94■□□□□ 0.46
GFAP-236ENST00000640545 ZAP70P43403 619 aa17.94■□□□□ 0.46
GFAP-236ENST00000640545 PPP4CP60510 307 aa17.94■□□□□ 0.46
GFAP-236ENST00000640545 PRRT2Q7Z6L0 340 aaPredicted RBP17.94■□□□□ 0.46
GFAP-236ENST00000640545 AACSQ86V21 672 aa17.94■□□□□ 0.46
GFAP-236ENST00000640545 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
GFAP-236ENST00000640545 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
GFAP-236ENST00000640545 EAF2Q96CJ1 260 aaPredicted RBP17.94■□□□□ 0.46
GFAP-236ENST00000640545 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
GFAP-236ENST00000640545 TRIM75PA6NK02 468 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 IDH1O75874 414 aaKnown RBP17.93■□□□□ 0.46
GFAP-236ENST00000640545 FMNL1O95466 1100 aaPredicted RBP17.93■□□□□ 0.46
GFAP-236ENST00000640545 PSMC4P43686 418 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 MAP3K12Q12852 859 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 TMED8Q6PL24 325 aaPredicted RBP17.93■□□□□ 0.46
GFAP-236ENST00000640545 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 SLC45A1Q9Y2W3 748 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
GFAP-236ENST00000640545 CYP7A1P22680 504 aa17.92■□□□□ 0.46
GFAP-236ENST00000640545 FOXP4Q8IVH2 680 aaPredicted RBP17.92■□□□□ 0.46
GFAP-236ENST00000640545 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
GFAP-236ENST00000640545 CRACR2BQ8N4Y2 399 aaPredicted RBP17.92■□□□□ 0.46
GFAP-236ENST00000640545 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms