RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 RFX5P48382 616 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 RSBN1LQ6PCB5 846 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 HHIPL2Q6UWX4 724 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 NAT10Q9H0A0 1025 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 RRAGDQ9NQL2 400 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 GINM1Q9NU53 330 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 ADAMTS7Q9UKP4 1686 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 MCM2P49736 904 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 BCAMP50895 628 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 ARMC9Q7Z3E5 817 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 KIAA0825Q8IV33 1275 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 TMTC2Q8N394 836 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 ANKRD20A12PQ8NF67 263 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 ZC3H15Q8WU90 426 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 FAM84BQ96KN1 310 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 SERPINA10Q9UK55 444 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 PPP2R3BQ9Y5P8 575 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 RFX7Q2KHR2 1363 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 ZBTB22O15209 634 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 PHKA1P46020 1223 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 RBM25P49756 843 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 AOC3Q16853 763 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 RBM26Q5T8P6 1007 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 OTUD7BQ6GQQ9 843 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 CCAR1Q8IX12 1150 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 BEGAINQ9BUH8 593 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 SUDS3Q9H7L9 328 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 ADARB2Q9NS39 739 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 CICQ96RK0 1608 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 F8W031 263 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 DHX16O60231 1041 aaKnown RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 FOXP4Q8IVH2 680 aaPredicted RBP6.55□□□□□ -1.36
RTTN-218ENST00000640408 CSADQ9Y600 493 aa6.55□□□□□ -1.36
RTTN-218ENST00000640408 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTTN-218ENST00000640408 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 FKBP1CQ5VVH2 108 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 DHX37Q8IY37 1157 aaKnown RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 ZNF213O14771 459 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 SMARCA5O60264 1052 aaPredicted RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTTN-218ENST00000640408 PTGER2P43116 358 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 EAPPQ56P03 285 aaPredicted RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 TRIM5Q9C035 493 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 DBNLQ9UJU6 430 aaKnown RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 ARID4AP29374 1257 aaPredicted RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 ATG9AQ7Z3C6 839 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 KRT23Q9C075 422 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 CENPHQ9H3R5 247 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 USP40Q9NVE5 1235 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 CNOT7Q9UIV1 285 aaKnown RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 IL1R1P14778 569 aa6.54□□□□□ -1.36
RTTN-218ENST00000640408 USP50Q70EL3 339 aaPredicted RBP6.54□□□□□ -1.36
RTTN-218ENST00000640408 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 ENTPD3O75355 529 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 MAGEB6Q8N7X4 407 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 ESR2Q92731 530 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 AS3MTQ9HBK9 375 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 PICK1Q9NRD5 415 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
RTTN-218ENST00000640408 PDE6AP16499 860 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 ZAP70P43403 619 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 IREB2P48200 963 aaKnown RBP6.53□□□□□ -1.36
RTTN-218ENST00000640408 CXCL9Q07325 125 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 ZNF831Q5JPB2 1677 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 DLG5Q8TDM6 1919 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 ARPP21Q9UBL0 812 aaPredicted RBP6.53□□□□□ -1.36
RTTN-218ENST00000640408 GLTPD2A6NH11 291 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 SLC4A4Q9Y6R1 1079 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 KDM3BQ7LBC6 1761 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 SALL1Q9NSC2 1324 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 FGFR2P21802 821 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 GNAQP50148 359 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 PLEKHM2Q8IWE5 1019 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 UBXN4Q92575 508 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 SWAP70Q9UH65 585 aa6.53□□□□□ -1.36
RTTN-218ENST00000640408 POLR3GO15318 223 aaPredicted RBP6.52□□□□□ -1.36
RTTN-218ENST00000640408 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.36
RTTN-218ENST00000640408 EFCC1Q9HA90 598 aa6.52□□□□□ -1.36
RTTN-218ENST00000640408 CPLX1O14810 134 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 XBP1P17861 261 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 MCM9Q9NXL9 1143 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 ITGB4P16144 1822 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 MINDY4BA8MYZ0 360 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 FAM163AQ96GL9 167 aaPredicted RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 IPO7O95373 1038 aaKnown RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 CCDC192P0DO97 292 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 GMPSP49915 693 aaPredicted RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 CFAP100Q494V2 611 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms