RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
NECAP1-221ENST00000639955 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
NECAP1-221ENST00000639955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 BLZF1Q9H2G9 400 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 RTEL1Q9NZ71 1219 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 ZSWIM5Q9P217 1185 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 NFE2L3Q9Y4A8 694 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 GTF2F1P35269 517 aaKnown RBP eCLIP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 PPARDQ03181 441 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 EVX2Q03828 476 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 SSRP1Q08945 709 aaKnown RBP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 PIGBQ92521 554 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 UBAC1Q9BSL1 405 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 SAMSN1Q9NSI8 373 aaKnown RBP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 BTG4Q9NY30 223 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 PCDHB6Q9Y5E3 794 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 KIF13AQ9H1H9 1805 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 A0A0U1RQJ8 604 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 NLRP12P59046 1061 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 ZNF174Q15697 407 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 LCORLQ8N3X6 602 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 ATRIPQ8WXE1 791 aa8.85□□□□□ -0.99
NECAP1-221ENST00000639955 ZCCHC17Q9NP64 241 aaKnown RBP8.85□□□□□ -0.99
NECAP1-221ENST00000639955 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 STARD3NLO95772 234 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 GYG1P46976 350 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 MYL5Q02045 173 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 DZIP3Q86Y13 1208 aaKnown RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 PCDH11XQ9BZA7 1347 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 PCDH11YQ9BZA8 1340 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 IRX5P78411 483 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 WTAPQ15007 396 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 RTN1Q16799 776 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 RBM43Q6ZSC3 357 aaKnown RBP8.84□□□□□ -0.99
NECAP1-221ENST00000639955 EP400NLQ6ZTU2 488 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 ANKRD7Q92527 254 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 FER1L4A9Z1Z3 1794 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 ARHGAP23Q9P227 1491 aa8.84□□□□□ -0.99
NECAP1-221ENST00000639955 CYP7A1P22680 504 aa8.84□□□□□ -1
NECAP1-221ENST00000639955 RASGRF1Q13972 1273 aa8.84□□□□□ -1
NECAP1-221ENST00000639955 FKBP15Q5T1M5 1219 aa8.84□□□□□ -1
NECAP1-221ENST00000639955 TMED8Q6PL24 325 aaPredicted RBP8.84□□□□□ -1
NECAP1-221ENST00000639955 TTLL11Q8NHH1 800 aa8.84□□□□□ -1
NECAP1-221ENST00000639955 EPSTI1Q96J88 318 aa8.84□□□□□ -1
NECAP1-221ENST00000639955 GTPBP4Q9BZE4 634 aaKnown RBP8.84□□□□□ -1
NECAP1-221ENST00000639955 NCAPD2Q15021 1401 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 C1orf167Q5SNV9 1468 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 PHACTR2O75167 634 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 AXDND1Q5T1B0 1012 aaPredicted RBP8.83□□□□□ -1
NECAP1-221ENST00000639955 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
NECAP1-221ENST00000639955 FOXP4Q8IVH2 680 aaPredicted RBP8.83□□□□□ -1
NECAP1-221ENST00000639955 JMYQ8N9B5 988 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
NECAP1-221ENST00000639955 CCDC12Q8WUD4 166 aaPredicted RBP8.83□□□□□ -1
NECAP1-221ENST00000639955 GDAP1L1Q96MZ0 367 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 VWA3AA6NCI4 1184 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 NMT2O60551 498 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 ADD2P35612 726 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 GSDMDP57764 484 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -1
NECAP1-221ENST00000639955 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 IFNL3Q8IZI9 196 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 UBN2Q6ZU65 1347 aa8.83□□□□□ -1
NECAP1-221ENST00000639955 CTSWP56202 376 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 EVCP57679 992 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 DYNLL1P63167 89 aaKnown RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 MAP3K12Q12852 859 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 TOGARAM2Q6ZUX3 1019 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 NLRP10Q86W26 655 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 HOMEZQ8IX15 550 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 KRT222Q8N1A0 295 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 EPB41L4AQ9HCS5 686 aaPredicted RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 SLIT1O75093 1534 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 KDM3BQ7LBC6 1761 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 SH2B2O14492 632 aaPredicted RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 CTIFO43310 598 aaKnown RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 RAD21O60216 631 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 YEATS4O95619 227 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 ZFYP08048 801 aaPredicted RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 SLC39A14Q15043 492 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 BRAPQ7Z569 592 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 SPATA5Q8NB90 893 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 NEK11Q8NG66 645 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 SMARCE1Q969G3 411 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 WDR24Q96S15 920 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 VPS16Q9H269 839 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 POLR3EQ9NVU0 708 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 OGFRQ9NZT2 677 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
NECAP1-221ENST00000639955 C5P01031 1676 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 CDKL5O76039 1030 aa8.82□□□□□ -1
NECAP1-221ENST00000639955 DNA2P51530 1060 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms