RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CPA1P15085 419 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 SCRN1Q12765 414 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 MAP9Q49MG5 647 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 KANK3Q6NY19 840 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CC2D1AQ6P1N0 951 aaPredicted RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 BRAPQ7Z569 592 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 SLC52A2Q9HAB3 445 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 KIF9Q9HAQ2 790 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CHCHD3Q9NX63 227 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 PUF60Q9UHX1 559 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 TRMT112Q9UI30 125 aaKnown RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 DIP2AQ14689 1571 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 KLF18A0A0U1RQI7 1052 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 USP27XA6NNY8 438 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 GOLGA8AA7E2F4 631 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 RHOXF2BP0C7M4 288 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 H2AFXP16104 143 aaPredicted RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 ARHGAP25P42331 645 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 STIM1Q13586 685 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 POLA2Q14181 598 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CRYMQ14894 314 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC102BQ68D86 513 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 TMTC2Q8N394 836 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 FAM227BQ96M60 508 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC85AQ96PX6 553 aaPredicted RBP6.42□□□□□ -1.38
SCARB2-218ENST00000639715 KIF2CQ99661 725 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 RHOXF2Q9BQY4 288 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 ANKARQ7Z5J8 1434 aa6.42□□□□□ -1.38
SCARB2-218ENST00000639715 NCOA3Q9Y6Q9 1424 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 GOLGA6L9A6NEM1 432 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 IFIT3O14879 490 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 TOP1P11387 765 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 METAP2P50579 478 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 LRRC23Q53EV4 343 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC50Q8IVM0 306 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 KBTBD3Q8NAB2 608 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 EPC1Q9H2F5 836 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 PPLO60437 1756 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 G3V3G9 751 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 TPD52L2O43399 206 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ZEB2O60315 1214 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 TOM1O60784 492 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 BRD3Q15059 726 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ZRSR2Q15696 482 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 DCAF8Q5TAQ9 597 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 NAA16Q6N069 864 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 FOXR1Q6PIV2 292 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 CLSTN2Q9H4D0 955 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 SNRKQ9NRH2 765 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 MAGEC2Q9UBF1 373 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 USP31Q70CQ4 1352 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 EYA2O00167 538 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 SKAP2O75563 359 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 SNUPNO95149 360 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 APOBRQ0VD83 1088 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 CCDC121Q6ZUS5 278 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ATRIPQ8WXE1 791 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 MAP4K1Q92918 833 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 THOC1Q96FV9 657 aaKnown RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 PARD6BQ9BYG5 372 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 MTMR6Q9Y217 621 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 PIK3C2BO00750 1634 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 KLHL33A6NCF5 533 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 SPTLC2O15270 562 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 WDHD1O75717 1129 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 HAND2P61296 217 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 FAM160A1Q05DH4 1040 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ARID5BQ14865 1188 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 CHRNA2Q15822 529 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 TMEM67Q5HYA8 995 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 KIRREL3Q8IZU9 778 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 FAM71BQ8TC56 605 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 LEO1Q8WVC0 666 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-218ENST00000639715 LRRC2Q9BYS8 371 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 TRIM4Q9C037 500 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 YIPF3Q9GZM5 350 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ZNF652Q9Y2D9 606 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 ZDHHC9Q9Y397 364 aa6.41□□□□□ -1.38
SCARB2-218ENST00000639715 NEURL1BA8MQ27 555 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 PRC1O43663 620 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 BUB1BO60566 1050 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-218ENST00000639715 POLR3DP05423 398 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-218ENST00000639715 SYKP43405 635 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 ADCY2Q08462 1091 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 SNCBQ16143 134 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 ME3Q16798 604 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 ARMC3Q5W041 872 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 UNC5CLQ8IV45 518 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 CAGE1Q8TC20 777 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-218ENST00000639715 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
SCARB2-218ENST00000639715 KRT23Q9C075 422 aa6.4□□□□□ -1.38
SCARB2-218ENST00000639715 RMI1Q9H9A7 625 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms