RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 AOPEPQ8N6M6 819 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 ZNF594Q96JF6 807 aaPredicted RBP11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 CGNQ9P2M7 1197 aaKnown RBP11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 WDR62O43379 1518 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 CETN3O15182 167 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 GAS8O95995 478 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 ZNF174Q15697 407 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 DCAF17Q5H9S7 520 aaPredicted RBP11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 UBXN1Q04323 297 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 CNNM4Q6P4Q7 775 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
KCNQ3-208ENST00000639496 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 DCPSQ96C86 337 aaKnown RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 FAM169AQ9Y6X4 670 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 AOX1Q06278 1338 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 CFBP00751 764 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 RXRBP28702 533 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 NLRX1Q86UT6 975 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 LLPHQ9BRT6 129 aaKnown RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 STMN4Q9H169 189 aaPredicted RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 PAXBP1Q9Y5B6 917 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 SKILP12757 684 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 JAKMIP2Q96AA8 810 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 PLIN2Q99541 437 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 HSF2BPO75031 334 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 STX17P56962 302 aa11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 MAK16Q9BXY0 300 aaKnown RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
KCNQ3-208ENST00000639496 RAPGEF1Q13905 1077 aa11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 BMS1Q14692 1282 aaKnown RBP11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 RNF34Q969K3 372 aa11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 CSRNP2Q9H175 543 aa11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 DNM3Q9UQ16 869 aa11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.56
KCNQ3-208ENST00000639496 ELP1O95163 1332 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 TGFBRAP1Q8WUH2 860 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 DNAJC25Q9H1X3 360 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 LRWD1Q9UFC0 647 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 TXKP42681 527 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 TUBB4BP68371 445 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 TFAP4Q01664 338 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 GLG1Q92896 1179 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 SYT1P21579 422 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 PDE4DQ08499 809 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 TMC4Q7Z404 712 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 SUCLG2Q96I99 432 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 NACA2Q9H009 215 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 KIAA0556O60303 1618 aa11.52□□□□□ -0.57
KCNQ3-208ENST00000639496 KLHDC4Q8TBB5 520 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 CEP63Q96MT8 703 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 CCNT1O60563 726 aaKnown RBP11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 KRT5P13647 590 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 PHKG2P15735 406 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 RPS6KB1P23443 525 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 CTSWP56202 376 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 INF2Q27J81 1249 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 CNGA4Q8IV77 575 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 NEO1Q92859 1461 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 SIK1P57059 783 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 ZSCAN23Q3MJ62 389 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 IWS1Q96ST2 819 aa11.51□□□□□ -0.57
KCNQ3-208ENST00000639496 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 MTRF1LQ9UGC7 380 aaKnown RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 ZNF532Q9HCE3 1301 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 RLBP1P12271 317 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 REXO1Q8N1G1 1221 aaKnown RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 SNX29Q8TEQ0 813 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms