RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 NKX2-3Q8TAU0 364 aa17.36■□□□□ 0.37
CNTNAP2-225ENST00000639247 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
CNTNAP2-225ENST00000639247 MCM9Q9NXL9 1143 aa17.36■□□□□ 0.37
CNTNAP2-225ENST00000639247 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
CNTNAP2-225ENST00000639247 TACC3Q9Y6A5 838 aa17.36■□□□□ 0.37
CNTNAP2-225ENST00000639247 MINDY4BA8MYZ0 360 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 EPHX2P34913 555 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 PLCD1P51178 756 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 PRAMEF18Q5VWM3 479 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 NBPF3Q9H094 633 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 NAPBQ9H115 298 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 CYP21A2P08686 494 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 CTDSPL2Q05D32 466 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 SH3BP5LQ7L8J4 393 aa17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 ADARB2Q9NS39 739 aaKnown RBP17.35■□□□□ 0.37
CNTNAP2-225ENST00000639247 MYH1P12882 1939 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 IGSF3O75054 1194 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 PLCG2P16885 1265 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 GNAT2P19087 354 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 TMEM39BQ9GZU3 492 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 NAV1Q8NEY1 1877 aa17.34■□□□□ 0.37
CNTNAP2-225ENST00000639247 SLC27A2O14975 620 aa17.33■□□□□ 0.37
CNTNAP2-225ENST00000639247 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.37
CNTNAP2-225ENST00000639247 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.37
CNTNAP2-225ENST00000639247 C22orf23Q9BZE7 217 aa17.33■□□□□ 0.37
CNTNAP2-225ENST00000639247 FAM196BA6NMK8 535 aa17.33■□□□□ 0.36
CNTNAP2-225ENST00000639247 DYNLL2Q96FJ2 89 aa17.33■□□□□ 0.36
CNTNAP2-225ENST00000639247 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.36
CNTNAP2-225ENST00000639247 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.36
CNTNAP2-225ENST00000639247 WDR90Q96KV7 1748 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 MYO1BO43795 1136 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 HSPA4P34932 840 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 ADCK5Q3MIX3 580 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 NACAP1Q9BZK3 213 aa17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
CNTNAP2-225ENST00000639247 DDX60LQ5H9U9 1706 aaKnown RBP17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 RPAP1Q9BWH6 1393 aaPredicted RBP17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 CPA1P15085 419 aa17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 ZSCAN29Q8IWY8 852 aaPredicted RBP17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 FZD1Q9UP38 647 aa17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 SCN4AP35499 1836 aa17.31■□□□□ 0.36
CNTNAP2-225ENST00000639247 PRDM1O75626 825 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 RASA3Q14644 834 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 ALX1Q15699 326 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 SNX14Q9Y5W7 946 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 PPARAQ07869 468 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 KIF2CQ99661 725 aa17.3■□□□□ 0.36
CNTNAP2-225ENST00000639247 ADM5C9JUS6 153 aa17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 ZNF213O14771 459 aa17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 C12orf60Q5U649 245 aa17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 SIPA1L1O43166 1804 aa17.29■□□□□ 0.36
CNTNAP2-225ENST00000639247 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 GIMAP6Q6P9H5 292 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 USP50Q70EL3 339 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 MIGA2Q7L4E1 593 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 PGAP2Q9UHJ9 254 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 NEDD4P46934 1319 aa17.28■□□□□ 0.36
CNTNAP2-225ENST00000639247 SHROOM1Q2M3G4 852 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 CHST3Q7LGC8 479 aa17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 TEPSINQ96N21 525 aa17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 CSRNP1Q96S65 589 aa17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 UPF3BQ9BZI7 483 aaKnown RBP17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 TSHZ2Q9NRE2 1034 aa17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 CTNNA3Q9UI47 895 aa17.27■□□□□ 0.36
CNTNAP2-225ENST00000639247 LAMB1P07942 1786 aa17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 E7EWF7 191 aa17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 RBM25P49756 843 aaKnown RBP17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 MMP14P50281 582 aa17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 FAM151AQ8WW52 585 aa17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 DNAJC18Q9H819 358 aa17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.35
CNTNAP2-225ENST00000639247 LAMA4Q16363 1823 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms