RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
PAX6-242ENST00000638878 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
PAX6-242ENST00000638878 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
PAX6-242ENST00000638878 DAGLAQ9Y4D2 1042 aa11.84□□□□□ -0.51
PAX6-242ENST00000638878 PCNTO95613 3336 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
PAX6-242ENST00000638878 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
PAX6-242ENST00000638878 ZAP70P43403 619 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 PPP4CP60510 307 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 KLHL40Q2TBA0 621 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 ANKRD45Q5TZF3 282 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 PI16Q6UXB8 463 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
PAX6-242ENST00000638878 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 PANK2Q9BZ23 570 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 GBA2Q9HCG7 927 aaPredicted RBP11.83□□□□□ -0.52
PAX6-242ENST00000638878 ECHDC1Q9NTX5 307 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.52
PAX6-242ENST00000638878 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 APBB1O00213 710 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 PLCG2P16885 1265 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 POLR2AP24928 1970 aaKnown RBP11.82□□□□□ -0.52
PAX6-242ENST00000638878 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
PAX6-242ENST00000638878 RASA3Q14644 834 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 ECM29Q5VYK3 1845 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 CDC42EP5Q6NZY7 148 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 GPATCH3Q96I76 525 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 TEPSINQ96N21 525 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 TRPM7Q96QT4 1865 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 HAUS7Q99871 368 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 TMOD2Q9NZR1 351 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
PAX6-242ENST00000638878 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
PAX6-242ENST00000638878 ENTPD3O75355 529 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 BAG3O95817 575 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 MAP2K2P36507 400 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 ECE1P42892 770 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 ZNF445P59923 1031 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 MAP3K12Q12852 859 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 RAI14Q9P0K7 980 aa11.81□□□□□ -0.52
PAX6-242ENST00000638878 AOX1Q06278 1338 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
PAX6-242ENST00000638878 RHBDL3P58872 404 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 MAP3K10Q02779 954 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 NAA16Q6N069 864 aaPredicted RBP11.8□□□□□ -0.52
PAX6-242ENST00000638878 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
PAX6-242ENST00000638878 SALL3Q9BXA9 1300 aa11.8□□□□□ -0.52
PAX6-242ENST00000638878 ERC2O15083 957 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 RGMBQ6NW40 437 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 ARMC9Q7Z3E5 817 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 PIH1D3Q9NQM4 214 aaKnown RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 BTDP43251 543 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 HUNKP57058 714 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
PAX6-242ENST00000638878 ZNF408Q9H9D4 720 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 FAM198AQ9UFP1 575 aa11.79□□□□□ -0.52
PAX6-242ENST00000638878 RFX7Q2KHR2 1363 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 WDR33Q9C0J8 1336 aaKnown RBP11.78□□□□□ -0.52
PAX6-242ENST00000638878 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
PAX6-242ENST00000638878 IDH1O75874 414 aaKnown RBP11.78□□□□□ -0.52
PAX6-242ENST00000638878 GLRX3O76003 335 aaKnown RBP11.78□□□□□ -0.52
PAX6-242ENST00000638878 VEGFBP49765 207 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 SLC9C2Q5TAH2 1124 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
PAX6-242ENST00000638878 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
PAX6-242ENST00000638878 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 OSBPL3Q9H4L5 887 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
PAX6-242ENST00000638878 COL2A1P02458 1487 aaPredicted RBP11.77□□□□□ -0.52
PAX6-242ENST00000638878 MYH2Q9UKX2 1941 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms