RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 APBB1O00213 710 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 ZAP70P43403 619 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 GTF2A2P52657 109 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 RHBDL3P58872 404 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 CTU1Q7Z7A3 348 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 PTPN18Q99952 460 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
CACNA1A-259ENST00000638114 CCL15-CCL14A0A0B4J2E2 113 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 CCDC85CA6NKD9 419 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 FKTNO75072 461 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 CCL15Q16663 113 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 NAA16Q6N069 864 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 NOL10Q9BSC4 688 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 ZNF112Q9UJU3 913 aa20.5■□□□□ 0.87
CACNA1A-259ENST00000638114 SH3BP5LQ7L8J4 393 aa20.49■□□□□ 0.87
CACNA1A-259ENST00000638114 BRI3BPQ8WY22 251 aa20.49■□□□□ 0.87
CACNA1A-259ENST00000638114 ATRNL1Q5VV63 1379 aa20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 MYO5AQ9Y4I1 1855 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 DDTLA6NHG4 134 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 IRF6O14896 467 aa20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 PPIL2Q13356 520 aa20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 KIF1BPQ96EK5 621 aa20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 PIH1D3Q9NQM4 214 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-259ENST00000638114 PPATQ06203 517 aa20.47■□□□□ 0.87
CACNA1A-259ENST00000638114 CRHR2Q13324 411 aa20.47■□□□□ 0.87
CACNA1A-259ENST00000638114 SNAPC2Q13487 334 aa20.47■□□□□ 0.87
CACNA1A-259ENST00000638114 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
CACNA1A-259ENST00000638114 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-259ENST00000638114 NPM3O75607 178 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 BAG3O95817 575 aa20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 CETPP11597 493 aa20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 NOL9Q5SY16 702 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 SH3RF3Q8TEJ3 882 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 AATFQ9NY61 560 aaKnown RBP eCLIP20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 NDUFB9Q9Y6M9 179 aa20.46■□□□□ 0.87
CACNA1A-259ENST00000638114 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
CACNA1A-259ENST00000638114 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-259ENST00000638114 TAF1CQ15572 869 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-259ENST00000638114 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
CACNA1A-259ENST00000638114 PHF20L1A8MW92 1017 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 IGSF3O75054 1194 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 IFIT2P09913 472 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 SLURP2P0DP57 97 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 PLCG2P16885 1265 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 PKN2Q16513 984 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 ADGRA1Q86SQ6 560 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 OSBPL5Q9H0X9 879 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 PICK1Q9NRD5 415 aa20.44■□□□□ 0.86
CACNA1A-259ENST00000638114 CYP7A1P22680 504 aa20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 SCYL3Q8IZE3 742 aa20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 YTHDC1Q96MU7 727 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 ZFYVE28Q9HCC9 887 aa20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-259ENST00000638114 BTBD19C9JJ37 291 aa20.42■□□□□ 0.86
CACNA1A-259ENST00000638114 PPP4CP60510 307 aa20.42■□□□□ 0.86
CACNA1A-259ENST00000638114 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
CACNA1A-259ENST00000638114 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.42■□□□□ 0.86
CACNA1A-259ENST00000638114 FAM196BA6NMK8 535 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 MAP3K12Q12852 859 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 MAGEB6Q8N7X4 407 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 TGFBRAP1Q8WUH2 860 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 ERO1AQ96HE7 468 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 KCNH4Q9UQ05 1017 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 DOCK1Q14185 1865 aa20.41■□□□□ 0.86
CACNA1A-259ENST00000638114 TBC1D12O60347 775 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 SP3Q02447 781 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 MAPKAPK5Q8IW41 473 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 CD99L2Q8TCZ2 262 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 CDK5RAP2Q96SN8 1893 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 ZCCHC17Q9NP64 241 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 HPS5Q9UPZ3 1129 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 ZHX2Q9Y6X8 837 aa20.4■□□□□ 0.86
CACNA1A-259ENST00000638114 PTPRAP18433 802 aa20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 TTF1Q15361 905 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 FBXO46Q6PJ61 603 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-259ENST00000638114 FLT1P17948 1338 aa20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 CXCL11O14625 94 aa20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 LRRCC1Q9C099 1032 aa20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 DHX36Q9H2U1 1008 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 FOCADQ5VW36 1801 aa20.38■□□□□ 0.85
CACNA1A-259ENST00000638114 GOLIM4O00461 696 aa20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 ANKRD23Q86SG2 305 aa20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms