RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 CALUO43852 315 aaPredicted RBP21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 KCNA4P22459 653 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 CTAGE3PQ8IX95 158 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 ASIC3Q9UHC3 531 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 FGD6Q6ZV73 1430 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 GTF3C6Q969F1 213 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 TBC1D8O95759 1140 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 ATICP31939 592 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 UTP14CQ5TAP6 766 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 PRPF38AQ8NAV1 312 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 RNF34Q969K3 372 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 PLCG2P16885 1265 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 LCA5Q86VQ0 697 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 ALG1Q9BT22 464 aa21.45■■□□□ 1.02
CACNA1A-257ENST00000638009 GIMAP6Q6P9H5 292 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 HEATR3Q7Z4Q2 680 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 SERPINB6P35237 376 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 TMOD3Q9NYL9 352 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 MMEL1Q495T6 779 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 VTI1AQ96AJ9 217 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 TRIM55Q9BYV6 548 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 RGS16O15492 202 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 SSFA2P28290 1259 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 NACA2Q9H009 215 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 RSBN1LQ6PCB5 846 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 EXOC7Q9UPT5 735 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 NUB1Q9Y5A7 615 aa21.44■■□□□ 1.02
CACNA1A-257ENST00000638009 SNCBQ16143 134 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 TRIM56Q9BRZ2 755 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 BAIAP2L1Q9UHR4 511 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 GSTA1P08263 222 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 GSTA2P09210 222 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 PLCD3Q8N3E9 789 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 GFAPP14136 432 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 UBE3BQ7Z3V4 1068 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 RRP36Q96EU6 259 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 KRT12Q99456 494 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 DDX21Q9NR30 783 aaKnown RBP eCLIP21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 SLC9C1Q4G0N8 1177 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 GRK7Q8WTQ7 553 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 ELP1O95163 1332 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 EHBP1L1Q8N3D4 1523 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 DKC1O60832 514 aaKnown RBP eCLIP21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 CFAP70Q5T0N1 1121 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 JADE1Q6IE81 842 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 MED4Q9NPJ6 270 aa21.43■■□□□ 1.02
CACNA1A-257ENST00000638009 P4HA1P13674 534 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 VPS41P49754 854 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 NAPAP54920 295 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 POLR3CQ9BUI4 534 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 FCHSD1Q86WN1 690 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 PAXIP1Q6ZW49 1069 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 ECHDC1Q9NTX5 307 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 TFIP11Q9UBB9 837 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 ZFXP17010 805 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 STX2P32856 288 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 CCDC186Q7Z3E2 898 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 FAM186BQ8IYM0 893 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 TEX12Q9BXU0 123 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 LMNB1P20700 586 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 LMOD1P29536 600 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 CEP19Q96LK0 163 aa21.42■■□□□ 1.02
CACNA1A-257ENST00000638009 SPTLC2O15270 562 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 ARHGAP6O43182 974 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 DCAF17Q5H9S7 520 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 UQCRFS1P1P0C7P4 283 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 YWHAEP62258 255 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 RABEP2Q9H5N1 569 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 EEF1DP29692 281 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 BRDTQ58F21 947 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 PRDM11Q9NQV5 511 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 MIS12Q9H081 205 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 TXLNGQ9NUQ3 528 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 CCDC152Q4G0S7 254 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 TMTC4Q5T4D3 741 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 RUNDC3BQ96NL0 473 aa21.41■■□□□ 1.02
CACNA1A-257ENST00000638009 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 STK38LQ9Y2H1 464 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 RTEL1-TNFRSF6BF6WH68 1400 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 OGFOD1Q8N543 542 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 RIOK1Q9BRS2 568 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 EIF3CLB5ME19 914 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 KRT8P05787 483 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 PLCD1P51178 756 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 EIF3CQ99613 913 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 FAM212AQ96EL1 285 aa21.4■■□□□ 1.02
CACNA1A-257ENST00000638009 HAUS3Q68CZ6 603 aa21.39■■□□□ 1.02
CACNA1A-257ENST00000638009 RIPOR2Q9Y4F9 1068 aa21.39■■□□□ 1.02
CACNA1A-257ENST00000638009 MAD1L1Q9Y6D9 718 aa21.39■■□□□ 1.02
CACNA1A-257ENST00000638009 IRX5P78411 483 aaPredicted RBP21.39■■□□□ 1.02
CACNA1A-257ENST00000638009 IWS1Q96ST2 819 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms