RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 VGLL4Q14135 290 aa17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 MIGA1Q8NAN2 632 aa17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 OPTNQ96CV9 577 aa17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 DDX4Q9NQI0 724 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 ZBTB48P10074 688 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 RHBDL3P58872 404 aa17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 PAG1Q9NWQ8 432 aa17.49■□□□□ 0.39
CACNA1A-249ENST00000637777 MANSC4A6NHS7 340 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 ATP5JP18859 108 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 USP5P45974 858 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 ADGRA1Q86SQ6 560 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 MAPKAPK5Q8IW41 473 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 TGFBRAP1Q8WUH2 860 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
CACNA1A-249ENST00000637777 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 IGSF3O75054 1194 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 DYNLL1P63167 89 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 EDC3Q96F86 508 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 ECHDC1Q9NTX5 307 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 RNF186Q9NXI6 227 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 RFX7Q2KHR2 1363 aa17.47■□□□□ 0.39
CACNA1A-249ENST00000637777 INPP5BP32019 993 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 IRX6P78412 446 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 AAMPQ13685 434 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 PICK1Q9NRD5 415 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 SAGE1Q9NXZ1 904 aa17.46■□□□□ 0.39
CACNA1A-249ENST00000637777 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.38
CACNA1A-249ENST00000637777 PDE6AP16499 860 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 SLC4A8Q2Y0W8 1093 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 HAUS7Q99871 368 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 SNCAIPQ9Y6H5 919 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 CASP8AP2Q9UKL3 1982 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 MYH7P12883 1935 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
CACNA1A-249ENST00000637777 MAGEB6P1A0A0J9YX57 407 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 GJA5P36382 358 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 INHBEP58166 350 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 PPP4CP60510 307 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 SH3BP5LQ7L8J4 393 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 ERO1BQ86YB8 467 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 CRACR2BQ8N4Y2 399 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 FLT1P17948 1338 aa17.44■□□□□ 0.38
CACNA1A-249ENST00000637777 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 ERC2O15083 957 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 TBC1D8O95759 1140 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 TM4SF4P48230 202 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 GTF2A2P52657 109 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 MYH1P12882 1939 aa17.43■□□□□ 0.38
CACNA1A-249ENST00000637777 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 CCL15-CCL14A0A0B4J2E2 113 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 ALDH1A1P00352 501 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 CCL15Q16663 113 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 ZSCAN25Q6NSZ9 544 aa17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 CRNKL1Q9BZJ0 848 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-249ENST00000637777 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 PPIL2Q13356 520 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 SNAPC2Q13487 334 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 PALD1Q9ULE6 856 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 COL2A1P02458 1487 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 DOCK1Q14185 1865 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 NAV1Q8NEY1 1877 aa17.41■□□□□ 0.38
CACNA1A-249ENST00000637777 MX1P20591 662 aa17.4■□□□□ 0.38
CACNA1A-249ENST00000637777 PPATQ06203 517 aa17.4■□□□□ 0.38
CACNA1A-249ENST00000637777 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
CACNA1A-249ENST00000637777 ZNF112Q9UJU3 913 aa17.4■□□□□ 0.38
CACNA1A-249ENST00000637777 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
CACNA1A-249ENST00000637777 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms