RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CLIC4Q9Y696 253 aa11.24□□□□□ -0.61
CACNA1A-248ENST00000637774 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-248ENST00000637774 TYRO3Q06418 890 aa11.24□□□□□ -0.61
CACNA1A-248ENST00000637774 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-248ENST00000637774 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
CACNA1A-248ENST00000637774 TNKSO95271 1327 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 TCHHQ07283 1943 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 SLIT2O94813 1529 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 ATP2B2Q01814 1243 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 EVX2Q03828 476 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 PICALMQ13492 652 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 MAPKAPK5Q8IW41 473 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 NMT2O60551 498 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 PDILTQ8N807 584 aa11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-248ENST00000637774 SPTLC2O15270 562 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 BAZ2BQ9UIF8 2168 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 ZNF165P49910 485 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 ZNF804AQ7Z570 1209 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 ZNF654Q8IZM8 581 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 BTBD18B2RXH4 712 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 TMEM87AQ8NBN3 555 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 DYNLL2Q96FJ2 89 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-248ENST00000637774 GTF2IP78347 998 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 GRAPQ13588 217 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 ITGB4P16144 1822 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
CACNA1A-248ENST00000637774 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 GUCY1A2P33402 732 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 PDE4BQ07343 736 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 VPS54Q9P1Q0 977 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 PCDHA7Q9UN72 937 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.62
CACNA1A-248ENST00000637774 KIF28PB7ZC32 967 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 BAG3O95817 575 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 ZSCAN30Q86W11 494 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 NSUN4Q96CB9 384 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 XBP1P17861 261 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 DIS3L2Q8IYB7 885 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 FANCBQ8NB91 859 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 ZC3H12CQ9C0D7 883 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 GLI3P10071 1580 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 GYS1P13807 737 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 GPSM2P81274 684 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 CREBRFQ8IUR6 639 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 RASSF8Q8NHQ8 419 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
CACNA1A-248ENST00000637774 TFAP4Q01664 338 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 NR5A1Q13285 461 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 SLC10A5Q5PT55 438 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 CLIC6Q96NY7 704 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 CABP5Q9NP86 173 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 PPP1R1BQ9UD71 204 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 COL16A1Q07092 1604 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 EIF6P56537 245 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 HOMER1Q86YM7 354 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 WDR66Q8TBY9 1149 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 XDHP47989 1333 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 SCNN1DP51172 638 aa11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-248ENST00000637774 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms