RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ZNF827Q17R98 1081 aa21.86■■□□□ 1.09
CLN5-219ENST00000637537 STAG1Q8WVM7 1258 aa21.86■■□□□ 1.09
CLN5-219ENST00000637537 TMEM87BQ96K49 555 aa21.86■■□□□ 1.09
CLN5-219ENST00000637537 SCAND2PQ9GZW5 306 aaPredicted RBP21.86■■□□□ 1.09
CLN5-219ENST00000637537 ZSCAN16Q9H4T2 348 aaPredicted RBP21.86■■□□□ 1.09
CLN5-219ENST00000637537 CCDC39Q9UFE4 941 aa21.86■■□□□ 1.09
CLN5-219ENST00000637537 GPSM2P81274 684 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 CRY2Q49AN0 593 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 CCDC183Q5T5S1 534 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 PHKBQ93100 1093 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 AIFM3Q96NN9 605 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 CNNM2Q9H8M5 875 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 POLRMTO00411 1230 aaKnown RBP21.85■■□□□ 1.09
CLN5-219ENST00000637537 KRT23Q9C075 422 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 XDHP47989 1333 aa21.85■■□□□ 1.09
CLN5-219ENST00000637537 RBM6P78332 1123 aaKnown RBP21.84■■□□□ 1.09
CLN5-219ENST00000637537 ILDR1Q86SU0 546 aaPredicted RBP21.84■■□□□ 1.09
CLN5-219ENST00000637537 ZBTB43O43298 467 aa21.84■■□□□ 1.09
CLN5-219ENST00000637537 APBA3O96018 575 aa21.84■■□□□ 1.09
CLN5-219ENST00000637537 LIG1P18858 919 aa21.84■■□□□ 1.09
CLN5-219ENST00000637537 ELP1O95163 1332 aa21.84■■□□□ 1.09
CLN5-219ENST00000637537 UBE2Q2LH0YL09 131 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 PRDM1O75626 825 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 SLC4A8Q2Y0W8 1093 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 C8orf76Q96K31 380 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 GRIK5Q16478 980 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 GIMAP6Q6P9H5 292 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 PGBD1Q96JS3 809 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 LEMD3Q9Y2U8 911 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 SLC12A7Q9Y666 1083 aa21.83■■□□□ 1.09
CLN5-219ENST00000637537 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.08
CLN5-219ENST00000637537 SGMS1Q86VZ5 419 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 GOLGA6L4A6NEF3 574 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 CCDC69A6NI79 296 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 UFL1O94874 794 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 USP28Q96RU2 1077 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 TSPY26PQ9H489 355 aa21.82■■□□□ 1.08
CLN5-219ENST00000637537 FAM217BQ9NTX9 383 aaPredicted RBP21.82■■□□□ 1.08
CLN5-219ENST00000637537 GOLGA8AA7E2F4 631 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 USP17L12C9JPN9 530 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 USP17L21D6R901 530 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 POLR3DP05423 398 aaPredicted RBP21.81■■□□□ 1.08
CLN5-219ENST00000637537 DZIP1Q86YF9 867 aaKnown RBP21.81■■□□□ 1.08
CLN5-219ENST00000637537 LIFRP42702 1097 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 CAMK4Q16566 473 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 CTR9Q6PD62 1173 aa21.81■■□□□ 1.08
CLN5-219ENST00000637537 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
CLN5-219ENST00000637537 RBM17Q96I25 401 aaKnown RBP21.81■■□□□ 1.08
CLN5-219ENST00000637537 PDS5AQ29RF7 1337 aaKnown RBP21.81■■□□□ 1.08
CLN5-219ENST00000637537 FBXO18Q8NFZ0 1043 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 MYH2Q9UKX2 1941 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
CLN5-219ENST00000637537 WTAPQ15007 396 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 DIXDC1Q155Q3 683 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 UTP14CQ5TAP6 766 aaKnown RBP21.8■■□□□ 1.08
CLN5-219ENST00000637537 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
CLN5-219ENST00000637537 CCDC82Q8N4S0 544 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 CCDC94Q9BW85 323 aaPredicted RBP21.8■■□□□ 1.08
CLN5-219ENST00000637537 RNF41Q9H4P4 317 aaPredicted RBP21.8■■□□□ 1.08
CLN5-219ENST00000637537 CFAP45Q9UL16 551 aa21.8■■□□□ 1.08
CLN5-219ENST00000637537 ZNF772Q68DY9 489 aaPredicted RBP21.79■■□□□ 1.08
CLN5-219ENST00000637537 TDRD7Q8NHU6 1098 aaKnown RBP21.79■■□□□ 1.08
CLN5-219ENST00000637537 BRIP1Q9BX63 1249 aa21.79■■□□□ 1.08
CLN5-219ENST00000637537 NTRK3Q16288 839 aa21.79■■□□□ 1.08
CLN5-219ENST00000637537 DCP1AQ9NPI6 582 aaPredicted RBP21.79■■□□□ 1.08
CLN5-219ENST00000637537 DACT1Q9NYF0 836 aa21.79■■□□□ 1.08
CLN5-219ENST00000637537 SART3Q15020 963 aaKnown RBP21.78■■□□□ 1.08
CLN5-219ENST00000637537 ZNF804AQ7Z570 1209 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 ANAPC4Q9UJX5 808 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 MYH15Q9Y2K3 1946 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 KIF28PB7ZC32 967 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 LDHBP07195 334 aaKnown RBP21.78■■□□□ 1.08
CLN5-219ENST00000637537 CYP2D6P10635 497 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 BICD2Q8TD16 824 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 UBAC1Q9BSL1 405 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 ALG1Q9BT22 464 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 POLLQ9UGP5 575 aa21.78■■□□□ 1.08
CLN5-219ENST00000637537 ERICH2A1L162 156 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 OLFM4Q6UX06 510 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 NUP133Q8WUM0 1156 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 CCDC88AQ3V6T2 1871 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 NR1I2O75469 434 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 ESR2Q92731 530 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 CRNKL1Q9BZJ0 848 aaKnown RBP21.77■■□□□ 1.08
CLN5-219ENST00000637537 GGA1Q9UJY5 639 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 TNKSO95271 1327 aa21.77■■□□□ 1.08
CLN5-219ENST00000637537 DMTNQ08495 405 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 AKT1S1Q96B36 256 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 CD209Q9NNX6 404 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 PLSCR1O15162 318 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
CLN5-219ENST00000637537 MSL1Q68DK7 614 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 SYNE3Q6ZMZ3 975 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 WDR66Q8TBY9 1149 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 SLC26A6Q9BXS9 759 aa21.76■■□□□ 1.07
CLN5-219ENST00000637537 CDKL5O76039 1030 aa21.75■■□□□ 1.07
CLN5-219ENST00000637537 CPLX2Q6PUV4 134 aaKnown RBP21.75■■□□□ 1.07
CLN5-219ENST00000637537 MYRIPQ8NFW9 859 aa21.75■■□□□ 1.07
CLN5-219ENST00000637537 C6orf229H3BNL8 230 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms