RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 MYPNQ86TC9 1320 aa22.14■■□□□ 1.14
CIITA-215ENST00000637439 GNAI3P08754 354 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 GRK4P32298 578 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 MAP3K10Q02779 954 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 RASGRF1Q13972 1273 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 GPAT2Q6NUI2 795 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 MEIS3Q99687 375 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 ZHX2Q9Y6X8 837 aa22.14■■□□□ 1.13
CIITA-215ENST00000637439 A0A0G2JLL6 359 aaPredicted RBP22.13■■□□□ 1.13
CIITA-215ENST00000637439 ECM2O94769 699 aaPredicted RBP22.13■■□□□ 1.13
CIITA-215ENST00000637439 BCRP11274 1271 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 PTPRAP18433 802 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 FCGRTP55899 365 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 TIMM10P62072 90 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 MVPQ14764 893 aaKnown RBP22.13■■□□□ 1.13
CIITA-215ENST00000637439 PRRT2Q7Z6L0 340 aaPredicted RBP22.13■■□□□ 1.13
CIITA-215ENST00000637439 ARHGAP45Q92619 1136 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 SLC45A1Q9Y2W3 748 aa22.13■■□□□ 1.13
CIITA-215ENST00000637439 RFX7Q2KHR2 1363 aa22.12■■□□□ 1.13
CIITA-215ENST00000637439 A0A1B0GUL7 405 aa22.12■■□□□ 1.13
CIITA-215ENST00000637439 CTNND1O60716 968 aaKnown RBP22.12■■□□□ 1.13
CIITA-215ENST00000637439 AFG3L2Q9Y4W6 797 aa22.12■■□□□ 1.13
CIITA-215ENST00000637439 MROH7-TTC4A0A0A0MT08 1334 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 SRGAP3O43295 1099 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 CYP2C8P10632 490 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 BTDP43251 543 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 UBXN2AP68543 259 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 MTX1Q13505 466 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 MTFR1Q15390 333 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 SH3BP5LQ7L8J4 393 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 XAGE2Q96GT9 111 aa22.11■■□□□ 1.13
CIITA-215ENST00000637439 RARSP54136 660 aaKnown RBP22.1■■□□□ 1.13
CIITA-215ENST00000637439 TFCP2Q12800 502 aa22.1■■□□□ 1.13
CIITA-215ENST00000637439 GADL1Q6ZQY3 521 aa22.1■■□□□ 1.13
CIITA-215ENST00000637439 BIN2Q9UBW5 565 aaPredicted RBP22.1■■□□□ 1.13
CIITA-215ENST00000637439 MGAMO43451 1857 aa22.09■■□□□ 1.13
CIITA-215ENST00000637439 DOCK1Q14185 1865 aa22.09■■□□□ 1.13
CIITA-215ENST00000637439 DDTLA6NHG4 134 aaPredicted RBP22.09■■□□□ 1.13
CIITA-215ENST00000637439 NPM3O75607 178 aaKnown RBP22.09■■□□□ 1.13
CIITA-215ENST00000637439 MAP4K4O95819 1239 aaPredicted RBP22.09■■□□□ 1.13
CIITA-215ENST00000637439 GJB1P08034 283 aa22.09■■□□□ 1.13
CIITA-215ENST00000637439 PICALMQ13492 652 aa22.09■■□□□ 1.13
CIITA-215ENST00000637439 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
CIITA-215ENST00000637439 GPR75-ASB3A0A0A6YYF3 556 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 TBC1D12O60347 775 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 LDHCP07864 332 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 CCL5P13501 91 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 GJA8P48165 433 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 GSTO1P78417 241 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 MECOMQ03112 1051 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 PRKCZQ05513 592 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 SHISA4Q96DD7 197 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
CIITA-215ENST00000637439 DDX4Q9NQI0 724 aaKnown RBP22.08■■□□□ 1.13
CIITA-215ENST00000637439 COLQQ9Y215 455 aaPredicted RBP22.08■■□□□ 1.13
CIITA-215ENST00000637439 H0YGN5 161 aa22.07■■□□□ 1.12
CIITA-215ENST00000637439 FXR1P51114 621 aaKnown RBP eCLIP22.07■■□□□ 1.12
CIITA-215ENST00000637439 GORABQ5T7V8 394 aa22.07■■□□□ 1.12
CIITA-215ENST00000637439 RNF208Q9H0X6 261 aa22.07■■□□□ 1.12
CIITA-215ENST00000637439 PTPRFP10586 1907 aa22.06■■□□□ 1.12
CIITA-215ENST00000637439 IPO8O15397 1037 aaKnown RBP22.06■■□□□ 1.12
CIITA-215ENST00000637439 SMCR8Q8TEV9 937 aaPredicted RBP22.06■■□□□ 1.12
CIITA-215ENST00000637439 TRIM75PA6NK02 468 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 CAPN2P17655 700 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 RHBDL3P58872 404 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 SPATA5Q8NB90 893 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 DPF3Q92784 378 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 HTATIP2Q9BUP3 242 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.05■■□□□ 1.12
CIITA-215ENST00000637439 HMG20BQ9P0W2 317 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 AGTPBP1Q9UPW5 1226 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 PHIPQ8WWQ0 1821 aa22.05■■□□□ 1.12
CIITA-215ENST00000637439 CEP290O15078 2479 aa22.04■■□□□ 1.12
CIITA-215ENST00000637439 COL2A1P02458 1487 aaPredicted RBP22.04■■□□□ 1.12
CIITA-215ENST00000637439 ADCY3O60266 1144 aa22.04■■□□□ 1.12
CIITA-215ENST00000637439 TBC1D2Q9BYX2 928 aa22.04■■□□□ 1.12
CIITA-215ENST00000637439 OSBPL5Q9H0X9 879 aaPredicted RBP22.04■■□□□ 1.12
CIITA-215ENST00000637439 PNMA3Q9UL41 463 aa22.04■■□□□ 1.12
CIITA-215ENST00000637439 GABRQQ9UN88 632 aa22.04■■□□□ 1.12
CIITA-215ENST00000637439 TNPO2O14787 897 aaKnown RBP22.03■■□□□ 1.12
CIITA-215ENST00000637439 GNAI2P04899 355 aa22.03■■□□□ 1.12
CIITA-215ENST00000637439 ARID4AP29374 1257 aaPredicted RBP22.03■■□□□ 1.12
CIITA-215ENST00000637439 IRF5Q13568 498 aa22.03■■□□□ 1.12
CIITA-215ENST00000637439 PROCA1Q8NCQ7 364 aaPredicted RBP22.03■■□□□ 1.12
CIITA-215ENST00000637439 PXYLP1Q8TE99 480 aa22.03■■□□□ 1.12
CIITA-215ENST00000637439 ZNF384Q8TF68 577 aa22.03■■□□□ 1.12
CIITA-215ENST00000637439 NSUN4Q96CB9 384 aaKnown RBP22.03■■□□□ 1.12
CIITA-215ENST00000637439 FLT3LGP49771 235 aa22.02■■□□□ 1.12
CIITA-215ENST00000637439 G3BP1Q13283 466 aaKnown RBP eCLIP22.02■■□□□ 1.12
CIITA-215ENST00000637439 UBE2Q1Q7Z7E8 422 aa22.02■■□□□ 1.12
CIITA-215ENST00000637439 U2AF1L4Q8WU68 220 aaKnown RBP22.02■■□□□ 1.12
CIITA-215ENST00000637439 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
CIITA-215ENST00000637439 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
CIITA-215ENST00000637439 UQCRFS1P1P0C7P4 283 aa22.01■■□□□ 1.11
CIITA-215ENST00000637439 SLURP2P0DP57 97 aa22.01■■□□□ 1.11
CIITA-215ENST00000637439 COA7Q96BR5 231 aa22.01■■□□□ 1.11
CIITA-215ENST00000637439 NOL10Q9BSC4 688 aaKnown RBP22.01■■□□□ 1.11
CIITA-215ENST00000637439 SGPL1O95470 568 aa22■■□□□ 1.11
CIITA-215ENST00000637439 PABPC4Q13310 644 aaKnown RBP eCLIP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms