RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 A0A0G2JLL6 359 aaPredicted RBP22.6■■□□□ 1.21
CTSD-209ENST00000637158 BCRP11274 1271 aa22.6■■□□□ 1.21
CTSD-209ENST00000637158 GPAT2Q6NUI2 795 aa22.6■■□□□ 1.21
CTSD-209ENST00000637158 PRRT2Q7Z6L0 340 aaPredicted RBP22.6■■□□□ 1.21
CTSD-209ENST00000637158 ABCF2Q9UG63 623 aa22.6■■□□□ 1.21
CTSD-209ENST00000637158 CTNND1O60716 968 aaKnown RBP22.59■■□□□ 1.21
CTSD-209ENST00000637158 ECM2O94769 699 aaPredicted RBP22.59■■□□□ 1.21
CTSD-209ENST00000637158 GJB1P08034 283 aa22.59■■□□□ 1.21
CTSD-209ENST00000637158 PTPRAP18433 802 aa22.59■■□□□ 1.21
CTSD-209ENST00000637158 BIN2Q9UBW5 565 aaPredicted RBP22.59■■□□□ 1.21
CTSD-209ENST00000637158 PA2G4Q9UQ80 394 aaKnown RBP22.59■■□□□ 1.21
CTSD-209ENST00000637158 AFG3L2Q9Y4W6 797 aa22.59■■□□□ 1.21
CTSD-209ENST00000637158 ATRNL1Q5VV63 1379 aa22.59■■□□□ 1.21
CTSD-209ENST00000637158 GNAI3P08754 354 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 CYP2C8P10632 490 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 CAPN2P17655 700 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 GJA8P48165 433 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 FXR1P51114 621 aaKnown RBP eCLIP22.58■■□□□ 1.21
CTSD-209ENST00000637158 TIMM10P62072 90 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 RASGRF1Q13972 1273 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 MVPQ14764 893 aaKnown RBP22.58■■□□□ 1.21
CTSD-209ENST00000637158 MTFR1Q15390 333 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 SLAIN1Q8ND83 568 aa22.58■■□□□ 1.21
CTSD-209ENST00000637158 COLQQ9Y215 455 aaPredicted RBP22.58■■□□□ 1.21
CTSD-209ENST00000637158 MAP4K4O95819 1239 aaPredicted RBP22.57■■□□□ 1.2
CTSD-209ENST00000637158 ADORA1P30542 326 aa22.57■■□□□ 1.2
CTSD-209ENST00000637158 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
CTSD-209ENST00000637158 ZSWIM8A7E2V4 1837 aa22.57■■□□□ 1.2
CTSD-209ENST00000637158 H0YGN5 161 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 NPM3O75607 178 aaKnown RBP22.56■■□□□ 1.2
CTSD-209ENST00000637158 CCL5P13501 91 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 BTDP43251 543 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 GADL1Q6ZQY3 521 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 DPF3Q92784 378 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 HTATIP2Q9BUP3 242 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 RNF208Q9H0X6 261 aa22.56■■□□□ 1.2
CTSD-209ENST00000637158 RFX7Q2KHR2 1363 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 A0A1B0GUL7 405 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 SRGAP3O43295 1099 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 TBC1D12O60347 775 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 PRKCZQ05513 592 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 SH3BP5LQ7L8J4 393 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 SMCR8Q8TEV9 937 aaPredicted RBP22.55■■□□□ 1.2
CTSD-209ENST00000637158 SHISA4Q96DD7 197 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 XAGE2Q96GT9 111 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 MEIS3Q99687 375 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 CEP290O15078 2479 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 MROH7-TTC4A0A0A0MT08 1334 aa22.55■■□□□ 1.2
CTSD-209ENST00000637158 GPR75-ASB3A0A0A6YYF3 556 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 DDTLA6NHG4 134 aaPredicted RBP22.54■■□□□ 1.2
CTSD-209ENST00000637158 LDHCP07864 332 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 GSTO1P78417 241 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 PICALMQ13492 652 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 MTX1Q13505 466 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 MYH2Q9UKX2 1941 aa22.54■■□□□ 1.2
CTSD-209ENST00000637158 PXYLP1Q8TE99 480 aa22.53■■□□□ 1.2
CTSD-209ENST00000637158 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
CTSD-209ENST00000637158 PNMA3Q9UL41 463 aa22.53■■□□□ 1.2
CTSD-209ENST00000637158 DOCK2Q92608 1830 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 MECOMQ03112 1051 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 TFCP2Q12800 502 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 GORABQ5T7V8 394 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 NEUROD6Q96NK8 337 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 DDX4Q9NQI0 724 aaKnown RBP22.52■■□□□ 1.2
CTSD-209ENST00000637158 AGTPBP1Q9UPW5 1226 aa22.52■■□□□ 1.2
CTSD-209ENST00000637158 TRIM75PA6NK02 468 aa22.51■■□□□ 1.19
CTSD-209ENST00000637158 TNPO2O14787 897 aaKnown RBP22.51■■□□□ 1.19
CTSD-209ENST00000637158 ADCY3O60266 1144 aa22.51■■□□□ 1.19
CTSD-209ENST00000637158 RARSP54136 660 aaKnown RBP22.51■■□□□ 1.19
CTSD-209ENST00000637158 IRF5Q13568 498 aa22.51■■□□□ 1.19
CTSD-209ENST00000637158 OSBPL5Q9H0X9 879 aaPredicted RBP22.51■■□□□ 1.19
CTSD-209ENST00000637158 NR2E3Q9Y5X4 410 aa22.51■■□□□ 1.19
CTSD-209ENST00000637158 IPO8O15397 1037 aaKnown RBP22.5■■□□□ 1.19
CTSD-209ENST00000637158 FLT3LGP49771 235 aa22.5■■□□□ 1.19
CTSD-209ENST00000637158 RHBDL3P58872 404 aa22.5■■□□□ 1.19
CTSD-209ENST00000637158 UBE2Q1Q7Z7E8 422 aa22.5■■□□□ 1.19
CTSD-209ENST00000637158 PROCA1Q8NCQ7 364 aaPredicted RBP22.5■■□□□ 1.19
CTSD-209ENST00000637158 U2AF1L4Q8WU68 220 aaKnown RBP22.5■■□□□ 1.19
CTSD-209ENST00000637158 COA7Q96BR5 231 aa22.5■■□□□ 1.19
CTSD-209ENST00000637158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.5■■□□□ 1.19
CTSD-209ENST00000637158 GABRQQ9UN88 632 aa22.5■■□□□ 1.19
CTSD-209ENST00000637158 SGPL1O95470 568 aa22.49■■□□□ 1.19
CTSD-209ENST00000637158 PABPC4Q13310 644 aaKnown RBP eCLIP22.49■■□□□ 1.196e-14■■■□□ 15.5
CTSD-209ENST00000637158 SPATA5Q8NB90 893 aa22.49■■□□□ 1.19
CTSD-209ENST00000637158 HMG20BQ9P0W2 317 aa22.49■■□□□ 1.19
CTSD-209ENST00000637158 RANBP2P49792 3224 aaKnown RBP22.49■■□□□ 1.19
CTSD-209ENST00000637158 CHRDL2Q6WN34 429 aa22.48■■□□□ 1.19
CTSD-209ENST00000637158 NSUN4Q96CB9 384 aaKnown RBP22.48■■□□□ 1.19
CTSD-209ENST00000637158 GNAI2P04899 355 aa22.47■■□□□ 1.19
CTSD-209ENST00000637158 G3BP1Q13283 466 aaKnown RBP eCLIP22.47■■□□□ 1.19
CTSD-209ENST00000637158 FAM110CQ1W6H9 321 aa22.47■■□□□ 1.19
CTSD-209ENST00000637158 NOL10Q9BSC4 688 aaKnown RBP22.47■■□□□ 1.19
CTSD-209ENST00000637158 UNC93B1Q9H1C4 597 aa22.47■■□□□ 1.19
CTSD-209ENST00000637158 RAI14Q9P0K7 980 aa22.47■■□□□ 1.19
CTSD-209ENST00000637158 COL2A1P02458 1487 aaPredicted RBP22.47■■□□□ 1.19
CTSD-209ENST00000637158 MGAMO43451 1857 aa22.46■■□□□ 1.19
CTSD-209ENST00000637158 DOCK1Q14185 1865 aa22.46■■□□□ 1.19
CTSD-209ENST00000637158 FARP2O94887 1054 aaPredicted RBP22.46■■□□□ 1.19
CTSD-209ENST00000637158 INHAP05111 366 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms