RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LARSQ9P2J5 1176 aaKnown RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TTLL3Q9Y4R7 772 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 GOLGA8RI6L899 631 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 FLOT1O75955 427 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 SKIP12755 728 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 GNA11P29992 359 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 GNG11P61952 73 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 HIF1AQ16665 826 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 TMEM67Q5HYA8 995 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 TMC6Q7Z403 805 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 CSRNP1Q96S65 589 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 POLR3CQ9BUI4 534 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RPRD1BQ9NQG5 326 aaKnown RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RP1L1Q8IWN7 2480 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 KRT33BQ14525 404 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RCSD1Q6JBY9 416 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 TTLL7Q6ZT98 887 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ZKSCAN3Q9BRR0 538 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 KIFC3Q9BVG8 833 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 GEMIN8Q9NWZ8 242 aaKnown RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 FAF1Q9UNN5 650 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ANGPT1Q15389 498 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 IFIT1BQ5T764 474 aaKnown RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 CYP26C1Q6V0L0 522 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 STX19Q8N4C7 294 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 LRGUKQ96M69 825 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 STX8Q9UNK0 236 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 SMCO2A6NFE2 343 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ARHGAP42A6NI28 874 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ZEB2O60315 1214 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 PRDM1O75626 825 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 DDX5P17844 614 aaKnown RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 NUTM2GQ5VZR2 741 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF804AQ7Z570 1209 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 SMAP1Q8IYB5 467 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 POMGNT1Q8WZA1 660 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC42Q96M95 316 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ATP6V0A4Q9HBG4 840 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RNF216Q9NWF9 866 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 TCHHQ07283 1943 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 BBOF1Q8ND07 529 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RNF217Q8TC41 542 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 RSPH14Q9UHP6 348 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 KIF21BO75037 1637 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 DEUP1Q05D60 604 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 ANKRD20A3Q5VUR7 823 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 EFCAB13Q8IY85 973 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 KCNH5Q8NCM2 988 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 NEK1Q96PY6 1258 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 PPARGP37231 505 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 IRX5P78411 483 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 OTUB1Q96FW1 271 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-212ENST00000636194 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
SCN1A-212ENST00000636194 CAPN2P17655 700 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 IARSP41252 1262 aaKnown RBP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 METAP2P50579 478 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 MMEL1Q495T6 779 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 WAPLQ7Z5K2 1190 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 USP6NLQ92738 828 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 NUP58Q9BVL2 599 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 HMG20BQ9P0W2 317 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 SUCLA2Q9P2R7 463 aaPredicted RBP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 PARP2Q9UGN5 583 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 GSNP06396 782 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 BIRC3Q13489 604 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 RSBN1LQ6PCB5 846 aaPredicted RBP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 AFAP1Q8N556 730 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 FAM71BQ8TC56 605 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 IFIH1Q9BYX4 1025 aaKnown RBP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 TXLNGQ9NUQ3 528 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 JRKLQ9Y4A0 524 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 ARHGAP5Q13017 1502 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC78A2IDD5 438 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 SRGAP2BP0DMP2 458 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 CTAGE3PQ8IX95 158 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 BBS5Q8N3I7 341 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 KCNG4Q8TDN1 519 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 VPS37BQ9H9H4 285 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 PALMDQ9NP74 551 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 IPO5O00410 1097 aaKnown RBP6.65□□□□□ -1.34
SCN1A-212ENST00000636194 SPOPO43791 374 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 OPHN1O60890 802 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 ANO6Q4KMQ2 910 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 EXOC4Q96A65 974 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 EFHD1Q9BUP0 239 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
SCN1A-212ENST00000636194 ATP6V1AP38606 617 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 ASPHQ12797 758 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 IQCB1Q15051 598 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 CERS3Q8IU89 383 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 RRP36Q96EU6 259 aaKnown RBP6.65□□□□□ -1.35
SCN1A-212ENST00000636194 IWS1Q96ST2 819 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 NBPF3Q9H094 633 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 RBSNQ9H1K0 784 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 RABEP2Q9H5N1 569 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 BRPF3Q9ULD4 1205 aa6.65□□□□□ -1.35
SCN1A-212ENST00000636194 UBASH3AP57075 661 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms