RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 RXRAP19793 462 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 ME1P48163 572 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 FAM160A1Q05DH4 1040 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 SNW1Q13573 536 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 KRT40Q6A162 431 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 TDRD7Q8NHU6 1098 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 MRPS27Q92552 414 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 NAP1L5Q96NT1 182 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 NLRP3Q96P20 1036 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 ANKRD2Q9GZV1 360 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 GJB4Q9NTQ9 266 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-209ENST00000635885 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 SPTLC2O15270 562 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 PPARAQ07869 468 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 WTAPQ15007 396 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 MICU3Q86XE3 530 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 CCDC144CPQ8IYA2 1237 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 RIOK1Q9BRS2 568 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 ABCF2Q9UG63 623 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 DUOX1Q9NRD9 1551 aa12.04□□□□□ -0.48
SYNGAP1-209ENST00000635885 ZBTB22O15209 634 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 CAVIN2O95810 425 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 IFNAR1P17181 557 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 TM4SF1P30408 202 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 RTN1Q16799 776 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 TPTE2Q6XPS3 522 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 VPS37DQ86XT2 251 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 PHKBQ93100 1093 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
SYNGAP1-209ENST00000635885 MINDY4BA8MYZ0 360 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 TPM3P06753 285 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 KLRK1P26718 216 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 HIBADHP31937 336 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 TRIM29Q14134 588 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 SART3Q15020 963 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 STX1AQ16623 288 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 STK11IPQ8N1F8 1099 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 MPNDQ8N594 471 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZNF384Q8TF68 577 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 SDR42E1Q8WUS8 393 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 WASF1Q92558 559 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZKSCAN3Q9BRR0 538 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 BRIP1Q9BX63 1249 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 SLC26A6Q9BXS9 759 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-209ENST00000635885 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 ERICH2A1L162 156 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZNF165P49910 485 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 RCAN1P53805 252 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 SLC39A14Q15043 492 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 IQCB1Q15051 598 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 SEC23AQ15436 765 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZNF830Q96NB3 372 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 IRS2Q9Y4H2 1338 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 NAV1Q8NEY1 1877 aa12.01□□□□□ -0.49
SYNGAP1-209ENST00000635885 FGRP09769 529 aa12□□□□□ -0.49
SYNGAP1-209ENST00000635885 CMA1P23946 247 aa12□□□□□ -0.49
SYNGAP1-209ENST00000635885 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
SYNGAP1-209ENST00000635885 ZNF75DP51815 510 aa12□□□□□ -0.49
SYNGAP1-209ENST00000635885 NDUFA8P51970 172 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms