RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 UBE3CQ15386 1083 aa10.27□□□□□ -0.76
CDKL5-209ENST00000635828 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.76
CDKL5-209ENST00000635828 APPBP2Q92624 585 aa10.27□□□□□ -0.76
CDKL5-209ENST00000635828 PGAP2Q9UHJ9 254 aa10.27□□□□□ -0.76
CDKL5-209ENST00000635828 ZBTB22O15209 634 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 MYH1P12882 1939 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 RFX7Q2KHR2 1363 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 GSG1L2A8MUP6 293 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 CST9Q5W186 159 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 SLC44A5Q8NCS7 719 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDKL5-209ENST00000635828 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
CDKL5-209ENST00000635828 SLC4A4Q9Y6R1 1079 aa10.27□□□□□ -0.77
CDKL5-209ENST00000635828 RRP1BQ14684 758 aaKnown RBP10.26□□□□□ -0.77
CDKL5-209ENST00000635828 DYNLL2Q96FJ2 89 aa10.26□□□□□ -0.77
CDKL5-209ENST00000635828 DCP1AQ9NPI6 582 aaPredicted RBP10.26□□□□□ -0.77
CDKL5-209ENST00000635828 DIAPH3Q9NSV4 1193 aa10.26□□□□□ -0.77
CDKL5-209ENST00000635828 HDLBPQ00341 1268 aaKnown RBP10.26□□□□□ -0.77
CDKL5-209ENST00000635828 CCDC84Q86UT8 332 aaPredicted RBP10.26□□□□□ -0.77
CDKL5-209ENST00000635828 PNMA8AQ86V59 439 aaPredicted RBP10.26□□□□□ -0.77
CDKL5-209ENST00000635828 DNAJC18Q9H819 358 aa10.26□□□□□ -0.77
CDKL5-209ENST00000635828 DDX60LQ5H9U9 1706 aaKnown RBP10.25□□□□□ -0.77
CDKL5-209ENST00000635828 HAND2P61296 217 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 JAG1P78504 1218 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
CDKL5-209ENST00000635828 NAV1Q8NEY1 1877 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 APPP05067 770 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 HSPD1P10809 573 aaKnown RBP10.25□□□□□ -0.77
CDKL5-209ENST00000635828 PPP4CP60510 307 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 LDHDQ86WU2 507 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 MRIQ9BWK5 157 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 USP5P45974 858 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 GSTO1P78417 241 aa10.25□□□□□ -0.77
CDKL5-209ENST00000635828 ZSCAN29Q8IWY8 852 aaPredicted RBP10.25□□□□□ -0.77
CDKL5-209ENST00000635828 CDCA5Q96FF9 252 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 OSBPL5Q9H0X9 879 aaPredicted RBP10.24□□□□□ -0.77
CDKL5-209ENST00000635828 MCM9Q9NXL9 1143 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 USP17L12C9JPN9 530 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 USP17L21D6R901 530 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 MYO1BO43795 1136 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 PRDM1O75626 825 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 TOMM70O94826 608 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 CTDSPL2Q05D32 466 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
CDKL5-209ENST00000635828 SGSM2O43147 1006 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 BAG3O95817 575 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 FGAP02671 866 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 LDHCP07864 332 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 CSRNP1Q96S65 589 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 ESYT1Q9BSJ8 1104 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 IDI2Q9BXS1 227 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 MINDY4BA8MYZ0 360 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 CLEC10AQ8IUN9 316 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 ZKSCAN4Q969J2 545 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-209ENST00000635828 DGKZQ13574 1117 aa10.23□□□□□ -0.77
CDKL5-209ENST00000635828 ATRNL1Q5VV63 1379 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 RPAP1Q9BWH6 1393 aaPredicted RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 OTOFQ9HC10 1997 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 ZSCAN25Q6NSZ9 544 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 CDC37L1Q7L3B6 337 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 CHMP4CQ96CF2 233 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 CLMNQ96JQ2 1002 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 HELLSQ9NRZ9 838 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 UBE2Q2LH0YL09 131 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 INPP5BP32019 993 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 NOL10Q9BSC4 688 aaKnown RBP10.22□□□□□ -0.77
CDKL5-209ENST00000635828 PASKQ96RG2 1323 aa10.22□□□□□ -0.77
CDKL5-209ENST00000635828 CDC45O75419 566 aa10.21□□□□□ -0.77
CDKL5-209ENST00000635828 FAM151AQ8WW52 585 aa10.21□□□□□ -0.77
CDKL5-209ENST00000635828 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.77
CDKL5-209ENST00000635828 LSG1Q9H089 658 aaKnown RBP10.21□□□□□ -0.77
CDKL5-209ENST00000635828 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
CDKL5-209ENST00000635828 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.77
CDKL5-209ENST00000635828 GDF11O95390 407 aa10.21□□□□□ -0.77
CDKL5-209ENST00000635828 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.78
CDKL5-209ENST00000635828 TDO2P48775 406 aa10.21□□□□□ -0.78
CDKL5-209ENST00000635828 USP2O75604 605 aaPredicted RBP10.2□□□□□ -0.78
CDKL5-209ENST00000635828 MFAP1P55081 439 aaKnown RBP10.2□□□□□ -0.78
CDKL5-209ENST00000635828 GRM1Q13255 1194 aa10.2□□□□□ -0.78
CDKL5-209ENST00000635828 TBC1D10CQ8IV04 446 aa10.2□□□□□ -0.78
CDKL5-209ENST00000635828 TMOD2Q9NZR1 351 aa10.2□□□□□ -0.78
CDKL5-209ENST00000635828 APOBEC3FQ8IUX4 373 aaKnown RBP10.2□□□□□ -0.78
CDKL5-209ENST00000635828 ZIC5Q96T25 663 aa10.2□□□□□ -0.78
CDKL5-209ENST00000635828 PITPNM2Q9BZ72 1349 aa10.2□□□□□ -0.78
CDKL5-209ENST00000635828 POLR3DP05423 398 aaPredicted RBP10.2□□□□□ -0.78
CDKL5-209ENST00000635828 SMC1BQ8NDV3 1235 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms