RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 NIP7Q9Y221 180 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLN5-204ENST00000635761 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
CLN5-204ENST00000635761 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
CLN5-204ENST00000635761 PSME4Q14997 1843 aa9.49□□□□□ -0.89
CLN5-204ENST00000635761 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
CLN5-204ENST00000635761 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 BACH1O14867 736 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CLN5-204ENST00000635761 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
CLN5-204ENST00000635761 RFX1P22670 979 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLN5-204ENST00000635761 CCDC93Q567U6 631 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 PRICKLE2Q7Z3G6 844 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 LDHDQ86WU2 507 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 RTKN2Q8IZC4 609 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 CNTNAP1P78357 1384 aa9.48□□□□□ -0.89
CLN5-204ENST00000635761 FZD9O00144 591 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 PTSQ03393 145 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 CRY2Q49AN0 593 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 ZNF277Q9NRM2 450 aaPredicted RBP9.47□□□□□ -0.89
CLN5-204ENST00000635761 ZNF358Q9NW07 568 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 MIS18AQ9NYP9 233 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 ZNF541Q9H0D2 1346 aa9.47□□□□□ -0.89
CLN5-204ENST00000635761 MYH3P11055 1940 aa9.46□□□□□ -0.89
CLN5-204ENST00000635761 LRRC37AA6NMS7 1700 aa9.46□□□□□ -0.89
CLN5-204ENST00000635761 SPATA31C2B4DYI2 1134 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 ERVV-1B6SEH8 477 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L21D6R901 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 HOXA10P31260 410 aaPredicted RBP9.46□□□□□ -0.9
CLN5-204ENST00000635761 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.9
CLN5-204ENST00000635761 SMTNP53814 917 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 CRTC2Q53ET0 693 aaPredicted RBP9.46□□□□□ -0.9
CLN5-204ENST00000635761 GNASQ5JWF2 1037 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 TMEM214Q6NUQ4 689 aaKnown RBP9.46□□□□□ -0.9
CLN5-204ENST00000635761 SYNE4Q8N205 404 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLN5-204ENST00000635761 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
CLN5-204ENST00000635761 HACL1Q9UJ83 578 aa9.46□□□□□ -0.9
CLN5-204ENST00000635761 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 FOXN1O15353 648 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 EPHX2P34913 555 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 VEGFBP49765 207 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 PTK7Q13308 1070 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 PNMA8AQ86V59 439 aaPredicted RBP9.45□□□□□ -0.9
CLN5-204ENST00000635761 NPAS3Q8IXF0 933 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 GPC2Q8N158 579 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 PSMD1Q99460 953 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 NYXQ9GZU5 481 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 RIC1Q4ADV7 1423 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 SPEF2Q9C093 1822 aa9.45□□□□□ -0.9
CLN5-204ENST00000635761 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 A6NJY4 79 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 M0R2N6 131 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 RHOQP17081 205 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 POU4F2Q12837 409 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 MTFR1Q15390 333 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 EAPPQ56P03 285 aaPredicted RBP9.44□□□□□ -0.9
CLN5-204ENST00000635761 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 CNTROBQ8N137 903 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
CLN5-204ENST00000635761 PLEKHF1Q96S99 279 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 MAP3K15Q6ZN16 1313 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
CLN5-204ENST00000635761 ABCC12Q96J65 1359 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 RNF123Q5XPI4 1314 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 RASSF10A6NK89 507 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 DKK1O94907 266 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
CLN5-204ENST00000635761 TTLL7Q6ZT98 887 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 RHBDD1Q8TEB9 315 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
CLN5-204ENST00000635761 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
CLN5-204ENST00000635761 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
CLN5-204ENST00000635761 IBTKQ9P2D0 1353 aaPredicted RBP9.42□□□□□ -0.9
CLN5-204ENST00000635761 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
CLN5-204ENST00000635761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.42□□□□□ -0.9
CLN5-204ENST00000635761 SLC35F4A4IF30 521 aa9.42□□□□□ -0.9
CLN5-204ENST00000635761 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
CLN5-204ENST00000635761 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
CLN5-204ENST00000635761 SEC13P55735 322 aa9.42□□□□□ -0.9
CLN5-204ENST00000635761 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CLN5-204ENST00000635761 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms