RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ZNF341Q9BYN7 854 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
LINC00339-209ENST00000635450 WDHD1O75717 1129 aaPredicted RBP19.11■□□□□ 0.65
LINC00339-209ENST00000635450 GTF2A2P52657 109 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 DCAF15Q66K64 600 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 FBXO46Q6PJ61 603 aaPredicted RBP19.11■□□□□ 0.65
LINC00339-209ENST00000635450 OTOP1Q7RTM1 612 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 ZGPATQ8N5A5 531 aaKnown RBP19.11■□□□□ 0.65
LINC00339-209ENST00000635450 SPATA5Q8NB90 893 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 DBNDD2Q9BQY9 259 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 TRIM17Q9Y577 477 aa19.11■□□□□ 0.65
LINC00339-209ENST00000635450 RHBDL3P58872 404 aa19.1■□□□□ 0.65
LINC00339-209ENST00000635450 PPIL2Q13356 520 aa19.1■□□□□ 0.65
LINC00339-209ENST00000635450 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
LINC00339-209ENST00000635450 ZNF112Q9UJU3 913 aa19.1■□□□□ 0.65
LINC00339-209ENST00000635450 EXOC6BQ9Y2D4 811 aa19.1■□□□□ 0.65
LINC00339-209ENST00000635450 RBBP6Q7Z6E9 1792 aaKnown RBP19.09■□□□□ 0.65
LINC00339-209ENST00000635450 DDTLA6NHG4 134 aaPredicted RBP19.09■□□□□ 0.65
LINC00339-209ENST00000635450 BTBD19C9JJ37 291 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 PICALMQ13492 652 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 TAF1CQ15572 869 aaPredicted RBP19.09■□□□□ 0.65
LINC00339-209ENST00000635450 PKN2Q16513 984 aaKnown RBP19.09■□□□□ 0.65
LINC00339-209ENST00000635450 TNNI3KQ59H18 835 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 IDI2Q9BXS1 227 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 SNRKQ9NRH2 765 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.09■□□□□ 0.65
LINC00339-209ENST00000635450 FPGT-TNNI3KV9GXZ4 949 aa19.09■□□□□ 0.65
LINC00339-209ENST00000635450 KIAA0100Q14667 2235 aaKnown RBP19.08■□□□□ 0.65
LINC00339-209ENST00000635450 OTUD7BQ6GQQ9 843 aa19.08■□□□□ 0.64
LINC00339-209ENST00000635450 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
LINC00339-209ENST00000635450 NSUN4Q96CB9 384 aaKnown RBP19.08■□□□□ 0.64
LINC00339-209ENST00000635450 HOOK2Q96ED9 719 aa19.08■□□□□ 0.64
LINC00339-209ENST00000635450 FAM196BA6NMK8 535 aa19.07■□□□□ 0.64
LINC00339-209ENST00000635450 CCDC158Q5M9N0 1113 aa19.07■□□□□ 0.64
LINC00339-209ENST00000635450 FAM163AQ96GL9 167 aaPredicted RBP19.07■□□□□ 0.64
LINC00339-209ENST00000635450 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
LINC00339-209ENST00000635450 GPR75-ASB3A0A0A6YYF3 556 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 ENTPD3O75355 529 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 UQCRFS1P1P0C7P4 283 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 CETPP11597 493 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 SP3Q02447 781 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 SNAPC2Q13487 334 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 MOGSQ13724 837 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 TTC39AQ5SRH9 613 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 NOL9Q5SY16 702 aaKnown RBP19.06■□□□□ 0.64
LINC00339-209ENST00000635450 SPTY2D1Q68D10 685 aaPredicted RBP19.06■□□□□ 0.64
LINC00339-209ENST00000635450 SIRT2Q8IXJ6 389 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 RAI14Q9P0K7 980 aa19.06■□□□□ 0.64
LINC00339-209ENST00000635450 MKI67P46013 3256 aaKnown RBP19.06■□□□□ 0.64
LINC00339-209ENST00000635450 MGAMO43451 1857 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 PPATQ06203 517 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 ADGRA1Q86SQ6 560 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
LINC00339-209ENST00000635450 ERO1AQ96HE7 468 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 ARHGAP39Q9C0H5 1083 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 KCNH4Q9UQ05 1017 aa19.05■□□□□ 0.64
LINC00339-209ENST00000635450 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 ECM2O94769 699 aaPredicted RBP19.04■□□□□ 0.64
LINC00339-209ENST00000635450 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
LINC00339-209ENST00000635450 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 KIF1BPQ96EK5 621 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 CCDC8Q9H0W5 538 aaPredicted RBP19.04■□□□□ 0.64
LINC00339-209ENST00000635450 ZFYVE28Q9HCC9 887 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 NDUFB9Q9Y6M9 179 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
LINC00339-209ENST00000635450 ADGRA2Q96PE1 1338 aa19.03■□□□□ 0.64
LINC00339-209ENST00000635450 APBB1O00213 710 aa19.03■□□□□ 0.64
LINC00339-209ENST00000635450 CYP2E1P05181 493 aaPredicted RBP19.03■□□□□ 0.64
LINC00339-209ENST00000635450 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
LINC00339-209ENST00000635450 EAF2Q96CJ1 260 aaPredicted RBP19.03■□□□□ 0.64
LINC00339-209ENST00000635450 EFCC1Q9HA90 598 aa19.03■□□□□ 0.64
LINC00339-209ENST00000635450 PIH1D3Q9NQM4 214 aaKnown RBP19.03■□□□□ 0.64
LINC00339-209ENST00000635450 PTPN22Q9Y2R2 807 aa19.03■□□□□ 0.64
LINC00339-209ENST00000635450 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
LINC00339-209ENST00000635450 MYH1P12882 1939 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 MAP3K10Q02779 954 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 AACSQ86V21 672 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 SCYL3Q8IZE3 742 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 CLASRPQ8N2M8 674 aaKnown RBP19.02■□□□□ 0.64
LINC00339-209ENST00000635450 SH3RF3Q8TEJ3 882 aaPredicted RBP19.02■□□□□ 0.64
LINC00339-209ENST00000635450 IL1RAPL2Q9NP60 686 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 LRP2BPQ9P2M1 347 aa19.02■□□□□ 0.64
LINC00339-209ENST00000635450 DDX60LQ5H9U9 1706 aaKnown RBP19.01■□□□□ 0.63
LINC00339-209ENST00000635450 TLR2O60603 784 aa19.01■□□□□ 0.63
LINC00339-209ENST00000635450 CTGFP29279 349 aa19.01■□□□□ 0.63
LINC00339-209ENST00000635450 ZAP70P43403 619 aa19.01■□□□□ 0.63
LINC00339-209ENST00000635450 RRP1BQ14684 758 aaKnown RBP19.01■□□□□ 0.63
LINC00339-209ENST00000635450 CRBNQ96SW2 442 aa19.01■□□□□ 0.63
LINC00339-209ENST00000635450 PTPRAP18433 802 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 GSTO1P78417 241 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 GPAT2Q6NUI2 795 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
LINC00339-209ENST00000635450 BCL11AQ9H165 835 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.63
LINC00339-209ENST00000635450 CPA4Q9UI42 421 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 PTCH2Q9Y6C5 1203 aa19■□□□□ 0.63
LINC00339-209ENST00000635450 POTEFA5A3E0 1075 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms